Kitasatospora sp. MMS16-BH015: CFP65_1462
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Entry
CFP65_1462 CDS
T05366
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
kit
Kitasatospora sp. MMS16-BH015
Pathway
kit03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFP65_1462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kit03400
]
CFP65_1462
Enzymes [BR:
kit01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CFP65_1462
DNA repair and recombination proteins [BR:
kit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFP65_1462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AUG76359
UniProt:
A0A2H5AW28
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All DBs
Position
complement(1730011..1730877)
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AA seq
288 aa
AA seq
DB search
MTITEVDGRQLRLTHLDRVLYPETGWTKAAALRYYALVAPKLLPHLAGRPASFLRFPGGV
AEQRFWAKHLPAGAPDWLTTMQVTHSEGELEQVVVADLPTLIWAANLGALELHVPQWRED
PAEHDRLVVDLDPGPGMSVVECCAVALLARELLVADGLTVWPKTSGAKGLHLAVPLRPTP
ARTAGAYARELAARLRVAHPGLVVDRMERRLRTGRVFVDWSQNNSAKTTAAPYSLRAGRV
PGVSTPLEWAEVAACRSAEQLAFTPEQVAERAGDPWAGVLEEANWGRL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcacggaggtggacggcaggcagctccggctgacccatctggaccgagtgctc
taccccgagaccgggtggaccaaggccgccgcgctgcgctactacgccctggtggcaccg
aagttgctgccgcacctggctgggcggccggcctccttcctgcgcttcccgggtggggtg
gcggagcagcggttctgggccaagcacctgccggcgggggctccggactggctgactacg
atgcaagtgacgcacagcgagggcgagttggagcaggtggtggtggccgatctgcccacc
ctgatctgggcggccaatctcggcgcgctggagctgcacgtgccgcagtggcgggaggac
ccggccgagcacgaccggctggtggtcgacctggatccggggcccgggatgtcggtggtg
gagtgctgcgcggtggccctgctggccagggagttgctggtggcggacgggctgaccgtc
tggccgaagacctccggggcgaagggtctgcacctggcggtgccgctgcggccgactccg
gcgcggacggccggggcgtacgcgcgggagctggccgcccggctgcgggtggcgcacccc
gggttggtggtggaccggatggagcggcggctgcggacgggccgggtcttcgtggactgg
tcgcagaacaacagcgccaagaccacggccgcgccgtactcgttgcgggccgggcgggtg
ccgggcgtgtccaccccgctggagtgggccgaggtggcggcctgccggagtgcggagcag
ctggccttcaccccggagcaggtggccgagcgggccggtgacccgtgggccggggtgctg
gaggaggccaactggggtcggctgtaa
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