Klebsiella michiganensis RC10: VW41_16100
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Entry
VW41_16100 CDS
T03782
Name
(GenBank) type III effector protein
Organism
kmi
Klebsiella michiganensis RC10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AvrE_T3Es
Sir1
Motif
Other DBs
NCBI-ProteinID:
AJZ90434
LinkDB
All DBs
Position
complement(3492047..3497317)
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AA seq
1756 aa
AA seq
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MFSRFLGRHRGGQDAAQITVPVTASASRASSPSLYSQASANASRATSPSLYSQPSASSAS
VYSQPDVSDPNAIPSNEVGTPGSHFAELPPEIEPEKNMLLETRLSLDKKGRLDIETPATS
APLHALMEKTIGHDRLRYQNHLASDDGHQHVLLDKEGRLMTLRSQPGAFIAISHSQQKIE
WREVHQPHRGFMRRQSLEPAGQHLSWHDRQTVDIGGEKVRLPETGIRDRLTDSVTDGDGT
RYRLHDKKLYSFDSAANAWQSLSGEDDKLSSLSRQSDGMLWRVNDDKQLGSAVGDTIKVN
FEHKIDHYAVGPKRDALVLMSDDEKKPQVAWVANLAATDPQPRTLTLPENMTLKKTALHG
PLLFALDNNGRLLCGDKPDEHSTGLTFGDARHKPLLDNITQYVTATVEEDAKIEDMLADE
TDRLHLIVKDKYDQKHAITFHWHGGDLKPQSSWNLSDSMVLDYQKGLPQVTPAAQDVVDL
GRLGKLALHDGKVHYFNETTGLWAASDEKADKLQCGLDGQPWLMKDGELKRLKVNLSSNK
VDHGSNVFALPQVIKSVSADLATAGLDKAEKAQAFTVIDSRRYLAVNEKGDIGFHHIDTT
TRRNQRATQTLSQAALREKIETLVPGSAGKEDAAKVSDLALGEDKQLWLLSKEGSLFSLP
ENHWNSGKTDGLAKAVLPANEDGSQPELSALQTSAKGQVSALDKQGNTFIFKAGAWEKGE
PATAPAAEPNMARQNYERLTKASKDWRLPGTGITFKREVNFLGQTGQDGKQVRTSFRTRL
STFAFRPSLEWPRPIKTAAYSIQHRYAGREGLKDVYQQQGDLTQRLKALSRQPARAAPRP
GLSQRLETMSGEAARQWQPQEKALLEEMSSFARQLSDSSTHYCEQIGQHYGVRDERRQGA
TPSRFGLNNSHSGALNPSSSRQDNLTGQLGELLRRFPADKSNHAGAIIAELEARQITLNH
QKEQVPMGRQRDIHDDIGLVKSRVMLDVLALKSLHDSVDDLQQATLLSEPQRSAKMAEIA
ANVARLRDSEWGGNVIKTVTTQGFGNHKSLEANYDAIKAMTKAFSKENHGVNINTKTVMQ
AESQREMQDKMVSTVLSLESGENLAFSRTYGASATATVAPGTQVVAGVGGKVGADRGYTM
SFSRGDTGINVSFGRTGAVSATGIVGVGYNVLTDYNKTHKVYLDGDHKHPLSQGVRLGGG
VTLGGQLQSQHGVSFELAEHEIPGFIEQLGSGTLDPLEFLNRGANHSVKSGATQSFSVDI
NAAALASVGFPFTDSHEKDFPTSARLGGGVYANTNLLAGSRERTDSRNAEGQGVSHSDHR
LRAFNQMNAGANIAIPVSTTIQPKHKDPFSVGVGVGASVQLSINNRTTHSLTVDLKNAQP
VEGVHLEKLMTTLGKQFTDSASTQLLAKLKEEPKEGELPMSVADKLSQLDAHFTRWYPPA
DNAKARRPLLDTLQQLTARQQQADSLSVQNTLPEPSNAEVDALITGLRGEFTDLPSRQLL
DELTPVEGAPRLPMSAGERLGKLESHFARFIPPSRHHELTGNGPQAALQSLQQTVRQQNA
VLNQQQLVNKAEYQSTYKNLSRIDSNGLFHFVRHFMEGEFSPSNADRITQMMGEDYRLKA
LLRGLQDNSSAQAVVSLELKTKPREKLADQWANHAVTQDSIVDLLKDRDKLRLKSIAFTK
TQSKSDGFSTPSFLLGGSNGVSLSMNENLGTINFSYGDDDSAPLSYTVDGGVAQAEKEVK
SALKDAAEAGFMVKGG
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgttttttagggcggcaccgcggcggacaagacgccgcgcaaattacggtt
cccgtcacggcaagtgcatcgcgcgccagcagcccgagtctctatagtcaggccagcgcg
aatgcttcacgcgccaccagtccaagcctctacagccagcccagcgccagctccgccagc
gtttacagccagccggatgtttctgacccgaacgccatccccagtaatgaggtggggacg
cccggtagccactttgccgaactgccgccggagattgagcctgaaaagaacatgctgctg
gaaacccggctgtcgctcgataaaaaagggcgtctcgacattgagacgcccgccacgtcc
gcacctctgcacgccctgatggaaaaaactatcggtcacgatcgcctgcgttaccaaaac
catctggccagcgacgacggccatcagcatgtattgctggataaagaggggcgactgatg
acgctgcgcagccagcccggcgcttttatcgccatcagccacagccagcaaaaaatagag
tggcgagaagtacaccagccccatcggggatttatgcgccgccaaagcctggagcctgcc
gggcagcatctttcctggcacgatcgccagaccgtcgatattggcggggagaaagtacgc
ctgccggaaacgggtatccgcgaccgcctgacggacagcgtcaccgacggcgacggcacg
cgctaccgcctgcacgacaaaaaactctacagttttgacagcgccgccaatgcctggcaa
tcgctttccggcgaggacgacaagctctcctccctgtcgcgccagagcgacggcatgcta
tggcgggtgaatgacgacaaacagcttggcagcgccgtcggcgacacgatcaaagtcaat
tttgagcacaaaatcgaccactatgcggtgggcccgaagcgcgatgccctggtgttgatg
agtgatgatgagaagaagccgcaggtggcctgggtcgccaacctggcggcgaccgatcct
cagcccaggacgctgacgctgcctgaaaacatgacgctgaaaaaaacggccctgcatggc
ccgctgctgtttgccctggacaacaatggccggctgctctgcggtgacaaacccgacgaa
cacagcacggggctaaccttcggggatgcgcggcataaaccgctgctggataacatcacg
caatacgttaccgcgacggttgaggaagatgcgaaaattgaagatatgctggccgacgaa
accgaccggctgcaccttatcgtcaaggataagtacgaccaaaagcacgccatcaccttc
cactggcacggcggcgatctgaagccgcaaagcagctggaaccttagcgacagcatggtg
ctggactaccaaaaaggcctgccgcaggtcacgcctgccgcccaggatgtggtggatctc
gggcggctcggcaagctggctttgcacgacggaaaagtgcattacttcaacgaaaccacc
ggcctgtgggccgcttccgacgaaaaagcagacaagctgcagtgcggcctcgacggccag
ccgtggctgatgaaagatggtgaactcaagcgcctcaaggtgaacctgagcagcaacaaa
gtcgaccacggcagcaacgtttttgcgctgccacaggtgatcaaaagcgtcagcgccgat
ctggccacggccgggctggacaaagcggaaaaggcgcaggcgtttacggtgatcgacagc
cgccgctatctggcggtgaacgaaaaaggcgatatcggcttccaccacatagacaccacc
actcgccgcaatcaacgtgccacccagaccctaagccaggcagccttgcgggagaaaatt
gagacgctggtgcccggcagcgcggggaaagaagatgcggcaaaagtcagcgatctcgcc
ctcggggaagacaaacagctttggctgttaagcaaagaggggagcctgtttagcctgccg
gaaaatcactggaacagcggcaaaaccgacggattagcgaaggccgttttgccggcaaat
gaggacggcagccagcctgagctcagcgcgctacaaacctcggcgaaagggcaagtcagc
gcgctggataagcagggcaacacgtttatcttcaaggccggggcctgggaaaaaggcgaa
ccggcgactgcgccggcggcggagcccaacatggcgcgacagaattacgagcgcctgact
aaagcgtcaaaagactggcgtttaccgggcaccgggatcaccttcaaacgcgaagttaac
ttccttggccagaccggacaggacggcaaacaggttcgaacctcgttccgcacccgcctg
agcacgtttgccttccgcccctcgctggaatggccgcgcccgataaaaaccgccgcttac
tctattcagcaccgctacgccgggcgtgaaggactgaaggacgtttaccagcagcagggg
gatttgacccagcggctgaaggcgctctcccggcaaccggccagagctgccccacgccct
ggcctaagccagcgcctcgagaccatgagcggggaagcggcgcgccagtggcagccgcag
gaaaaggcgctgctggaagagatgagcagctttgcacgccagttgtcggacagcagcacg
cattactgtgagcagataggccagcactatggcgtacgcgatgaacgtcggcagggggcg
acaccgtctcgctttggcctgaacaatagccacagcggggcgctgaacccgtctagcagc
cgccaggataaccttaccgggcaactgggcgaactgctgcggcgcttccctgcggataaa
agcaaccacgcgggggcgattattgccgagctggaggcccggcaaatcacccttaaccat
cagaaagaacaggtgccgatggggcgccagcgcgatatccatgacgatatcgggctggtg
aaatccagggtgatgctggacgtgctggcgctgaaatccctgcatgattcggtggatgat
ctgcagcaggccacgctgctgagcgagcctcagcggtcggccaaaatggcggaaattgcc
gccaacgttgcccggctgagggacagcgaatggggcgggaacgtgattaaaacggtgacc
acccagggcttcggcaaccacaaatcgctggaggccaactacgacgccatcaaggcgatg
acgaaggcgttcagtaaagaaaaccacggcgtcaacatcaacaccaaaaccgtgatgcag
gcggaaagccagcgcgaaatgcaggacaaaatggtttccaccgtgctctctctggagagc
ggcgaaaacctggcattcagccgtacctatggggcttccgcgactgcgacggtggcgccg
ggtactcaggttgtggcgggcgttggcggcaaagtgggggctgaccgtggctacaccatg
agtttttctcgcggcgatacggggattaacgttagcttcggacgaaccggtgccgtctcg
gcaaccggcatcgtgggcgtcggttacaacgtcctgactgactacaacaaaacccacaaa
gtctacctcgatggcgaccataaacacccgctgtcacagggggttcgcctgggcggtggc
gtcacgctgggtgggcagcttcagtcccagcacggcgtctcgtttgaactggcagaacac
gaaattcctggtttcatcgaacaactgggcagcggcacgctggatccgctggagtttctg
aaccggggggccaaccacagcgtgaagagcggcgcgacccagagcttcagcgtggacatc
aacgcggccgcgctggcgagcgtcggctttccgtttaccgacagccacgagaaagatttc
cctaccagcgcccgcctgggcggcggtgtttatgccaacactaacctgctggcaggcagc
cgcgagcggaccgactcccgcaacgccgaagggcagggcgtcagccacagcgaccatcgc
ctgagggcgtttaaccagatgaacgccggggccaacattgccattccggtcagcaccacc
attcagccgaagcacaaagatcccttctcggtgggcgtcggggtaggagccagcgtgcag
ctgtcgatcaataaccggacgacgcacagtcttaccgttgatttaaaaaatgcgcaaccg
gtggaaggcgttcacctggaaaaactgatgaccacgctgggcaaacagtttaccgacagc
gcctccacgcagctgctggccaaactcaaagaggagccgaaagaaggggaactgccgatg
tccgtggccgacaaactcagccaactggatgctcatttcacccgctggtatccgcctgca
gataacgcaaaggcgcgccgcccgctgcttgatacgctgcagcagcttaccgcccggcag
cagcaggccgactcgctttccgtgcagaatacgctgccggaaccgagcaatgccgaagtg
gatgcgcttatcaccgggctacgcggcgagtttaccgatctccccagccgccagttgctg
gatgagctcacgccggtggagggggccccgcgcttgccgatgtccgcaggagagcggctg
ggtaaactggaaagccactttgcccgctttattccgccgtctcggcaccatgagctcacg
gggaacggcccccaggcggcgctgcagtcgctacagcaaaccgtgcgtcagcaaaatgcc
gtgcttaaccagcagcaactggtgaataaggcggagtaccagtcaacctataagaacctt
tcgcgcatcgacagtaacggtttgttccactttgttcgccactttatggaaggcgagttt
tcgccgagtaacgccgatcgcattacccagatgatgggcgaggattaccgactgaaagcg
cttctgcgggggctgcaggataacagcagtgcccaggcggtggtctctcttgagctgaaa
accaagccgcgggagaagctagccgaccagtgggcaaaccacgcggtcactcaggactcg
attgtcgacctgcttaaggaccgcgacaagctgcgcctgaaatctatcgcctttaccaaa
acgcagagtaaatccgatgggttctccacgccgtcatttttactcggcggctctaacggc
gtatcgctgtcgatgaatgaaaacctgggcaccatcaacttcagctacggcgacgacgac
agcgcgccgctcagctacaccgtggacggtggcgtcgctcaggcagaaaaagaggtgaaa
tcggcgctgaaagatgccgctgaggcaggatttatggtgaaaggaggataa
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