Kryptolebias marmoratus (mangrove rivulus): 108232507
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Entry
108232507 CDS
T05608
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022
Basal transcription factors
kmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108232507 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
108232507 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108232507 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108232507 (gtf2h2)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108232507 (gtf2h2)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108232507 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
108232507
NCBI-ProteinID:
XP_017265852
UniProt:
A0A3Q3BHF0
LinkDB
All DBs
Position
LG1:complement(4338136..4350511)
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AA seq
392 aa
AA seq
DB search
MDEESERAKRWEGGYERTWEVLKEDESGSLKATVEEILYQSKRKRVTESHGQVRLGMMRH
LYVVIDGSRSMEDQDLKPNRLTSTLKLMETFVDEYFDQNPISQVGIIITKNKRAEKLTDL
AGNPKKHIAALKKAVDTSCVGEPSLYNSLSLALQTLRHMPGHTSREVLIILSSLTTCDPA
NIYELVKTLKSVKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDEIHFKELLMLHVKPPP
ARSSSECSLIRMGFPQHMVASLTDQDAKPSFSMSHLDSSSDPGLSLRGYFCPQCHAKYTE
LPVECRVCGLTLVSAPHLARSFHHLFPLQDFIESPVEELQGSRFCQTCQAELKEKSVFSC
PSCLSVFCVECDLFIHESLHCCPCCIHSRTAT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagtcggagagagctaagcgctgggaggggggctatgaaaggacctgggag
gtgctgaaggaggatgagtctggttcacttaaagctacggtggaagaaatcctgtaccag
tccaaaaggaaaagggtgacagagagccatggacaagtcaggctggggatgatgcgtcac
ctgtatgttgtgatcgacggttcacgcagcatggaggaccaggacctgaaacccaaccgc
ctcacctccactctgaagctgatggagacctttgttgatgaatattttgaccagaatccc
atcagtcaggtgggtatcatcatcaccaaaaacaaaagggcagagaagctgacagacctg
gcaggaaaccctaagaagcacatcgctgctctgaagaaagctgtggacacgtcgtgtgtg
ggagaaccgtccctgtacaactcactgagcctggccttacagaccctcaggcacatgcca
ggacacacgagcagagaggtcctgatcatcctcagcagccttaccacgtgtgacccagcc
aacatctacgagctcgttaagaccctgaagtctgtaaaggtgcgcgtgtcggtgatcggc
ttgtcggcagaggtccgagtgtgcacagtgctgaccagagagacgggcggctcgtaccac
gtcattctggacgagattcacttcaaagagctcctgatgctgcacgtcaaacctcctcct
gcccgctcctcgtcagaatgctctttaatacgaatgggtttccctcagcacatggtggcc
tctctcactgaccaggatgccaaaccctcattcagcatgtcccatctggacagcagcagt
gatcctggcctgtctctgaggggatatttctgtccacagtgccacgccaagtacaccgag
cttcctgtggagtgtagagtctgtggtttgacgttggtgtctgccccccacctggccaga
tccttccatcacctcttccccctccaggattttatagagagcccagtggaggagcttcag
gggagcaggttctgtcagacgtgtcaggcggagctcaaagagaaaagtgtcttcagctgt
ccctcctgtctcagtgtgttctgtgtggagtgtgacctcttcatccacgagtctctgcac
tgctgcccctgctgcattcacagccggaccgcgacgtga
DBGET
integrated database retrieval system
