Kryptolebias marmoratus (mangrove rivulus): 108236147
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Entry
108236147 CDS
T05608
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108236147
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108236147
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
108236147
NCBI-ProteinID:
XP_017272108
UniProt:
A0A3Q3AMB6
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Position
LG12:17189777..17245430
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AA seq
465 aa
AA seq
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MLMSTDVASIMLPVNRGIMDRERDIDTAAAAAAAAGAHTNPAAGPAVVRGMKRGDPEPDA
QTAAALADLAGAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGL
VAPPFTTFPPPPPPQNGLPGTEFGPGAMFGAGAQGTAEVGVGTNGATSTSINLKTEEVPQ
GEAGAQCGAGGSGAGGSAGDSTEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI
IFNERGSKGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNG
EALSTLPYAGWKLSPMVGAVYGPELYAVPGFPYPTAAAAAATTAAAAAFRGAHLRGRGRP
VYSAVRAAVPQPAISAYPGVVYQDGFYGAAELYGGYPAAAAAAAYRYAQPAAVTGATAAA
AAYSDSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgcttcccgttaatcggggaataatggac
cgcgaaagggacattgatacagcggcggcggcagcggcagccgccggagcgcacacgaac
ccggccgcggggccagcggttgtccgggggatgaagcgcggagacccggagcccgacgct
cagaccgccgctgccctcgctgacctggccggggcggaatgcaaaagaccaaggatagac
gggaccgggagcgtggttggtgacatcggacagaacaacgagcctttaaaccccggtttc
catggctaccctcctcacagtcagggctctcaggattcgaccggaggacaggagggcttg
gtcgccccgcctttcacaaccttccctcctccacctcctcctcaaaatgggctcccggga
acagagtttggcccgggggccatgtttggcgctggggcccaaggtacagcggaggtaggg
gttggtactaacggagccaccagcacatcaatcaatttaaagacagaggaggtgcctcag
ggtgaggcgggggcacagtgtggcgcaggagggtcaggagcaggaggctctgcaggagac
tccacggaggccaaagggacccccaaacgcctccacgtctccaacatcccgttccgcttt
cgggacccagacctccggcagatgttcgggcaatttggaaagattctggatgtagagatt
attttcaatgagaggggttcaaagggttttggctttgtgacatttgaaaacagcgcagac
gcagagaaagccagggaaaagctccacggcacactggtagaaggtcggaagattgaggtg
aataatgccaccgccagggtgatgactaacaagaaaatggtcagcccctaccctaacgga
gaggctctcagcacgcttccctatgcagggtggaaactgagccccatggtgggggctgtg
tatggaccagagctctatgcagtcccagggtttccctatcctacagcagcagcagccgcc
gccacaacagcagccgctgcggcgtttcgcggcgcccacctgcggggccgaggtcggcct
gtttacagcgccgtgagggctgctgtgcctcagcctgccatctctgcctatcccggcgtg
gtgtatcaggatgggttttatggagctgcagagttatatggaggctaccccgctgctgcc
gctgctgctgcctatcgctacgcccagcctgcagccgtaaccggagcaaccgccgccgca
gccgcctacagtgacagttacggtcgggtgtacaccacagacccgtaccatgctttagct
ccagctgctgctgcttacggagttggagccatggcgagtttatatcgagcaggctacagt
cggtttgctccgtactaa
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