Kryptolebias marmoratus (mangrove rivulus): 108238689
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Entry
108238689 CDS
T05608
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108238689 (trim71)
04121 Ubiquitin system [BR:
kmr04121
]
108238689 (trim71)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108238689 (trim71)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108238689 (trim71)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108238689 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108238689
NCBI-ProteinID:
XP_017276435
UniProt:
A0A3Q3BRX0
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All DBs
Position
LG5:complement(16602991..16637072)
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AA seq
828 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSNHTSKRLHVLPCLHAFCR
QCLEGQRSPSDPLKLRCPTCDQKVSITEAGVDSLPSSNFLFSNLLDVVVSSEDQIQTKNG
HHHRGGLIGCSSGFHPCHRGPLHPQHMGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIERLGDSLHLSRVNVNTSQPGVSVSLAQSLQNNFALLSLFQDRMNFCQHH
DNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQQGRQAVQL
SMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLYLQV
EKLHQSLTKLDGTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQEDDRFMF
TPPDQALYIAIQSMGMISSGAFAPVTKAHGEGLKNVLRGKPASFTVIGYDHDGEPRLSGG
DAVSAVVVSVADGNLSAVEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHIQGSPFKVTV
KSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCGAFH
HKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQF
NYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHEDH
LVVTDFNNHRLLVIQPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRIQI
FEPNGNFLCKFGTQGSGYGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttccagactctgacctgcagacctgtccgctctgcaaggagctgtgcgga
tcctccgctcccatctcctccagctcctccacctcgtcctcctcctcgcacacgtcctcc
tcctccaaccacacctccaagaggctccacgtcctgccctgcctgcatgccttctgcagg
cagtgcctggagggccagcgcagtcccagcgaccccctgaagctgcggtgccccacctgc
gaccagaaggtttccatcaccgaggccggggtggactcgctgccgtcctccaacttcctc
ttcagcaacttgctggacgtggtggtgagctcggaagatcagatccagaccaagaacggc
caccatcaccgcggcggcttgattggctgctcctccggcttccacccctgccacaggggc
cctttgcacccgcagcacatgggggagcctcagtgcagctcctgcgacgaggagaaccca
gccacgtcccactgccttgactgccaggagtacctctgtgacaactgcgtgcgagcgcac
cagagggtccggctgaccaaagatcacttcatcgagcgcctgggagacagcctccaccta
agccgggtcaacgtcaacaccagccagccgggggtgtccgtgtccctcgcccagtccctg
cagaacaacttcgccctgttgtccctgttccaggatcggatgaacttctgccagcaccac
gacaacgaggtgttcctgttcttctgtgaaacctgctcggtgccaatctgcagggagtgc
agcgtgggccgtcacatgggccacacttttgtctacctgcaggacgccgtgcaagactgc
agggccatcaccatccagctgctggcagacgcccagcagggacgacaggccgtccagctg
agcatggagaaagtccaggccatggcagagcaggtggagatcaaggccaaggtggtgcag
actgaagtgaaggcgcttgtcctgaggcacaagaaagcactggaggagcgggagtgtgag
ctgctgtggaaggtggagaaaatccgccaggtgaaagccaagtctctgtacctgcaagtg
gagaaactccaccagagtctcaccaaactggatggcaccatcgctgctgtgagccaggtc
ctagatgagggccaccacctcgacgtgctgctggccagggagagaatgctcacccagatc
catgaactcaaggccctcaggggcctgctgcagccgcaggaggacgaccgcttcatgttc
actcctccagaccaggctctgtacattgccatccagtccatgggtatgatcagcagtgga
gcctttgcccccgtcaccaaagcccacggcgagggtctgaaaaacgtgctccgtggcaag
cctgcctccttcaccgtgatcggatacgaccacgatggcgagccccgtctctccggcggg
gacgccgtgtctgcggtcgtcgtgtcggtcgcagacggcaacctgtcggcggtggaggta
acggaccaccagaacggctcgtacaccgtcagttacctgcccaaaaccgagggggagcat
ctcgtgtccgtgctggtgtgcaaccagcacatccagggcagccccttcaaggtgacggtg
aagtcgggacggagctacggctccctcggctcccaggtgtcatcgttcggatgcgagggg
gagggagacggccagctgtgtcgtccgtggggcatcagcgtcgacaaggagggatacgtt
gtagtggctgatcgcagcaacaaccgcatacagatcttcaaaccttgcggcgccttccac
cataagttcggctctctggggtctcggcccggtcagtttgaccgaccagccggggtcgcc
tgcgacagtcagaggcgaatcattgtggctgataaggacaatcaccgtgtgcaggtgttt
actttcgagggccagtttctgctgaagtttggggaaaagggcaccaagaacgggcagttc
aactatccctgggacgtggccgtcaactctgagggcaagatcttggtctcggacaccagg
aaccaccgcgtgcagctcttcgcgcccgacggctcctttctcaacaagtacggcttcgaa
ggggctctgtggaaacacttcgactcgcccaggggagtagccttcaaccacgaggaccac
ctggtggtgaccgacttcaacaaccaccggctcctggtgatccagccggactgccagtcg
gctcgcttcctgggctccgaggggaccgggaacgggcagtttctgcggccgcagggcgtc
gccgtggaccaggagaaccgcatcatcgtggccgactcccgcaaccacaggatccaaatc
ttcgaacccaacggaaactttttatgcaaatttggcactcaggggagtggctacggacag
atggaccgcccctccggtgtggccgtgacgccggatggcgtcatcgtggttgttgacttc
ggaaataaccgcatcctcaagttctag
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