Kryptolebias marmoratus (mangrove rivulus): 108241542
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Entry
108241542 CDS
T05608
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108241542
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108241542
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Calcipressin
Motif
Other DBs
NCBI-GeneID:
108241542
NCBI-ProteinID:
XP_017281258
UniProt:
A0A3Q3BJB0
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Position
LG3:6756026..6815142
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AA seq
455 aa
AA seq
DB search
MLMSTDVASIMLPVSRALMDRELDGAMAGGVLPSPGGAPAAVRGMKRGDPEPDGQAAAAL
LDSTGAECKRPRMDGAGGLGEVGQNNDPLTLGYHGYAAHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGSSLYAAGAVQGPVEAGGAGNSAANAANSLSAQSDGSSQIESG
VGSGGGGGGGGPGEDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
SKGFGFVTFESSSDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGIAAL
PYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAATTAATFRGTHLRGRARPVYSAVRA
AVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSYGR
VYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcgtccatcatgctgcccgtgtcccgggctctcatggac
cgggagctggacggcgccatggccggcggggtgcttcccagcccgggcggcgctccggcg
gccgtgcggggcatgaagcgaggagacccggagcccgacggacaggcggcggccgcgctg
ctcgactccaccggggcggagtgcaagcggccccgcatggacggcgcgggagggctcggc
gaggtcggacagaacaacgatcctttgacccttggttaccacggctacgcggctcacagt
cagggctctcaggatagtgctggcggtcaggagggactcgtgcccccgcctttctccgcg
ttcccaccacctccaccgccgccccctcagaacggcctggccctggattacgggagcagc
ctgtatgcagcaggggccgtgcagggccccgtggaagccggcggagcggggaacagtgcc
gccaatgccgccaacagcctcagtgcccaatcagatgggtcctcccagattgagtctgga
gttggctcgggtggcgggggcggtggtgggggtcccggggaagattcagacgccaagggg
acccccaaacgtctccatgtctctaacatccccttccgcttccgagaccctgacctacgg
cagatgtttgggcaattcggcaaaatccttgacgtcgagatcattttcaacgagaggggt
tccaagggcttcggttttgtcacgttcgagtctagttcggatgcagagcgggccagagag
aagcttcacggcacgctggtggagggacgtaagatcgaggtcaataacgcgacagccaga
gtgatgacaaacaagaagatgaccacgccgtactctaacggagagggcatcgcagcgcta
ccatatgctggttggaagttgagcccgatggtcggagccatgtacagtcctgagctctac
acagttccaggcttcccttaccccgcagcagcagcagcagctgccgccaccacagctgca
acctttcgaggcacccacctccggggtcgagctcggcccgtctacagcgccgtccgggca
gctgtcccgcagcccgccatccccacctaccccggtgtgatggcctatcaggatggtttt
tacggtgcggccgacctctatggtggctatgcagcgtatcgttacgcccagccggccgct
gtagcgactcctgcagcagccgccgccgcagcagcagcttacagtgacagctatggacgc
gtttacacagcagacccctaccatgctgctcttgccccagctgcctacggtgtcggagcc
atggccacgctgtacaggggaggctacagtagattcgccccgtactaa
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