Kryptolebias marmoratus (mangrove rivulus): 108243027
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Entry
108243027 CDS
T05608
Name
(RefSeq) protocadherin gamma-A11-like
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
108243027
NCBI-ProteinID:
XP_017283690
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Position
LG9:17458273..17461750
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AA seq
562 aa
AA seq
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MRIGHTMKVQVLLFVSVLSLGSVHSQVSYSIPEEMLKGSLVGNMAKDFGLDVERLKSGKA
RIFSRDGDKYVELNKERGVLLIKNRIDREALCAETTPCALHFQIILENPMEFYSVTVEVT
DVNDNPPSFDKTDVKFKISESAVRGAKFILDRAVDLDVGVNGLQTYKLEPTENFVLRLHS
QADGTKNVEMVLEKALDREKQEHLSLVLTALDGGEPQMTGTMQILITVLDANDNAPILTQ
SIYKASVRENSPVGTVVMTVTATDADEGSNGKIAYSTSSTLDNARGLFEINPESGEIRLK
GNVDYEKARSFQINIRASDYGGLVDSCKVMIDVIDVNDNKPDIQIMSKSNVISEDAKLGT
VVTMINIEDADSGENGKVHCSINNDIPFVMKATTENFYTLMTDSELDRERAYEYNITVSC
SDEGVPSLSSSVTLSLQISDVNDNAPVFDRSSYEAYIVENNTPGLSIFTVKATDADWKQN
ARVSYILEDSSVNGVPVSSYVSVSADSGIIHAVRSLDYEQIKDFQFRVKAQDGGSPPLSS
NVTVKILIQDQNDNPPQPDKES
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcggacacacaatgaaagtgcaagtactgctgtttgtctcggtcctctccctc
ggctcggtgcacagtcaggtcagctactccattccggaggaaatgcttaaaggttcttta
gttggtaatatggctaaagattttggtttagacgttgaaagactaaagtccggcaaagct
cgcatatttagccgagacggtgacaaatatgttgagctgaataaagaaagaggcgtcctg
ctcattaaaaacagaatcgacagagaggcgctttgtgcagagacgacaccttgtgcgtta
cattttcagatcattttagaaaatcccatggagttttacagtgtgactgtagaggttaca
gatgttaatgacaacccaccctcgttcgataaaactgatgttaaatttaaaatcagtgag
tctgcagtccgtggagctaaatttattttagatcgcgccgttgatctagatgtgggtgtg
aacggattgcagacatataagcttgagccgacggagaattttgttcttaggttacacagt
caggcagacgggacaaagaacgttgaaatggttttagagaaagctctcgacagagaaaaa
caggagcacctttctttggttctgactgcgctcgatggcggagagccgcagatgacagga
acaatgcagatcctgatcactgtgttggacgctaacgacaatgctccaattcttacacag
tctatctataaggcttcagtcagagaaaattcaccggtaggaacagttgtaatgacagtc
actgctacagatgcagacgaaggctcgaacggtaaaatagcatattcaacatccagtaca
ttagataatgctcgtggattatttgaaataaatcctgaaagtggtgagattcgacttaaa
ggaaatgttgattatgaaaaagctcgatcattccagataaacatccgtgctagtgattac
ggcggactggttgattcatgtaaagtgatgattgacgtcatagacgtgaatgacaataaa
ccagatatccagattatgtcaaaatcaaatgtgatatcagaggatgcaaaacttggtact
gtggtgacgatgataaacatagaagatgcagactcaggtgagaacgggaaggttcattgt
tccattaataatgatattccttttgtgatgaaggcaacaacggaaaatttttatacttta
atgacagacagtgagttagacagagagagagcctatgagtataatatcacagtgagctgc
tctgatgaaggagtcccctccctctccagtagcgtcactctcagcttacagatatctgat
gtgaatgacaacgcacctgtctttgacaggagctcatatgaggcgtacattgtagaaaac
aacacaccaggtctctccatattcacagtgaaagctacagacgctgactggaagcagaat
gcccgtgtttcttacatactggaggactcctctgttaacggagtgccagtttcatcatat
gtgtcggttagtgctgatagtggcatcatccatgcagtgcgctctttggactatgagcag
atcaaagatttccagttccgcgtcaaggcgcaggatggaggctctcctccactcagcagc
aacgtgactgtgaaaatcctgatccaggaccagaacgataacccacctcagcccgacaaa
gagagctaa
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