Kryptolebias marmoratus (mangrove rivulus): 108243403
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Entry
108243403 CDS
T05608
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108243403
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Others
Others
108243403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Big_2
Motif
Other DBs
NCBI-GeneID:
108243403
NCBI-ProteinID:
XP_017284294
UniProt:
A0A3Q3BN19
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All DBs
Position
LG22:complement(16599364..16648105)
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AA seq
1207 aa
AA seq
DB search
METEWICLFILTSILGGTDAEVTCIPSCQLPPVIEVSSREASLLDWTDFSAAPAGDLVGF
GAELPGREERHDAAELREESSLKVRPRSEEQASVGPRRDRGKVSLPSQSAPGPAPGNATE
NRTGDIGNEPFSFRSRSAPSRRRPRSADTSWSGVGTEGAGEDPDREEFRLTSSTFALAGD
TAHNQAMVHWSGQNSSVILMLTKFYDFNSGRVTESSLWRSTDYGTTYEKLNEKVGTKSIL
SYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHSLAFDILSLLFHPEQEDWILAY
SHDQKLYVSVEFGRRWQLVQDSVVPNRFYWSRLGLDKEQGMIHLEVSVSDKRSQYITCKL
QNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVSVGGQTVHYVSYRRNAFYPMKLPKYTVP
KDLQIISTDDNQVVAAIQDWHQNDSYNLYMSEHRGLFFTLMLEDVVSSGGPEDNIMIDLY
EVAGIKGVFLSNKVVENQVKTYITYNKGRDWRLLQAPTTDLQGNKVYCEQPYCSLHLHLH
VSENPYASGNIVSKDTAPGIIIASGGVGPELTNANVSIFITSDAGNTWREIFQEEYSVFF
LNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSFPLYVDGVLGEPGEDILIMTIFG
HFSHRSEWQLVKIDFRPIFERWCTSEDYFTWQLHNEGEVCIMGMKRIFQKLRANARCVKA
RDQYISQMSDSCPCTEADFECDYGFERQIDGSCTPAFWFTPSATSRECITGDSFLNTTGY
RKALSNNCSEGSELKYSPRQQKCPSQAPRGLQLFTSEGTLVATLGMNVTFLVFLEEGLGS
MTSITVDFGDGTAISYVNISSIEDGVKHIYDKVGIYQVSATARNNLGLDRVNLYLHVSCQ
LEQVRLSAPLVVVKNKAVNFTTALRPSNVGSVTYFWWFDNKTEPVVTLDGAVSFTFNKEG
SHTVTVQASAGITIHQDQITVAVYDYFRSHALAFSSNLDELNPGVSEWREDIGRVVKSYI
VQVTGISEDQLLVTVNPGLPATAEVFIVPERRSGGRAMNDKWTHLDQLSQVLLSALNQDL
VQFVLRPGVQVNVFATRLSPAPLVDSSDNGYSSTAVIMLVSVALMGLVIFVIYKFKRKIP
GMNTYTAEQPDKEQEVIPTVTSIAVPNPEGDDLTSLDCVDTQLNSKNRGYLPSHTDINLS
DEAPHVF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagtggatttgcctcttcatcctaacttccatcctgggcggaacggacgcg
gaggtaacgtgcatcccctcgtgccagctgccgcctgttattgaggtatcgtcccgggaa
gcgtccctgctggattggaccgatttcagcgcggcacccgccggggacctggtgggcttc
ggcgcggagctccccggccgggaggaacggcacgacgccgcggagctgcgcgaagaaagt
tccctcaaagtgcggccgcgctcggaggagcaggcgagcgtcggtccgcggagggaccgc
ggaaaagtttccctcccttcccaaagtgcgcccggtccggctcccgggaacgcgacggag
aaccgcaccggggatataggaaacgagcccttttcctttcggagccggagcgcgccgagc
cggagacggccgcggagcgcggacaccagctggtccggagtcggaaccgagggcgctggc
gaggacccggaccgggaggagtttcgtctcacgagttccactttcgcactcgccggggac
acggctcacaaccaggcgatggtgcactggtccggacagaacagcagcgtgattctcatg
ttgacaaaattctacgacttcaactccggcagagtaacagagagttctttgtggaggtca
actgattatgggaccacatatgaaaaacttaatgagaaagtcgggaccaaaagcatcttg
agctacttgtatgtgagtccaaacaacaagaggaagatcatgttactaactgacccagag
gtggagagcagcctgctcattagccttgacgagggggcgtcctatcagaaacacagctta
gcctttgatatcctcagcctgctttttcaccctgagcaagaggactggatcctggcttac
agccatgaccaaaagctctatgtctcagttgagtttgggaggagatggcagctcgtgcaa
gacagcgtggttcccaacagattctactggtcgagactgggtttggacaaagagcaaggc
atgattcatctggaagtcagcgtctcggataaacggtcacagtacataacgtgcaaactt
cagaactgctctgacggaaacaagggcaagcctttccctggatttataatccccaattcc
ctcgtggtacaggatgaatacgttttcatccaggtgtcagtaggaggccaaactgttcat
tatgtgtcatatagaagaaacgctttctacccgatgaaacttcccaaatacaccgttcct
aaggacttgcagataatcagcacagatgataaccaggtggtggcagcgattcaggactgg
caccagaatgattcatacaacctgtacatgtcggagcacagggggctgttcttcaccctg
atgctggaggatgttgtgagcagcggcggtccagaggacaatatcatgatagacctgtac
gaggttgctgggattaaaggagtgttcctgtcaaataaagttgttgagaaccaagtgaaa
acttatatcacatacaacaagggcagagactggcgtcttcttcaggctccaacaaccgat
ctccagggaaacaaggtctattgtgaacaaccgtactgctcgctgcacctccaccttcac
gtctccgagaacccttacgcctcgggaaacattgtcagcaaagacacggctccgggaatt
ataatagcatcaggtggggtcggacctgagctgaccaacgcaaatgtcagcatctttatc
acgtctgatgctggaaacacatggagagagatttttcaggaagagtacagtgtgtttttc
ctgaatcaaggaggatctctggtggccatccgacacacacctctgccaattagacacatt
tggctgagttttgatgagggcagaaactgggacaaatatagcttcacctcctttccgctc
tatgttgacggggtgctaggggagcccggagaggacatcctcatcatgacaatatttggt
catttcagtcatcgatccgagtggcaactcgtcaagattgactttcggcccattttcgaa
cggtggtgcacatccgaagactatttcacgtggcagttacacaatgagggggaagtatgc
atcatgggaatgaagagaatcttccaaaaactgagagcaaacgctcgatgtgtcaaggcc
cgagatcagtatatttctcagatgtcagactcctgcccgtgcacagaagcagattttgag
tgtgactatggctttgagaggcagattgatgggagctgcactccggctttttggttcact
ccatcagcaacatctcgagaatgcataacgggagacagcttcctcaacacgacgggctac
cgcaaggctttgtctaacaactgcagtgagggaagtgagctgaagtacagccccaggcaa
caaaagtgtcccagtcaggctcccaggggcctccagctcttcaccagcgagggaacactt
gtagcaacactggggatgaatgtcaccttcttggtgtttctggaagagggtcttggctcc
atgacaagcataacggtggacttcggagatggaaccgccatttcctatgtgaacataagc
tctatcgaggacggggtcaagcacatctacgataaagttggaatctaccaagtctcagct
acagccaggaacaacctcggcctcgacagggtcaacctctaccttcatgtttcctgtcaa
cttgagcaagtgcggctctcggctcctttggtggtcgtcaagaacaaggcggtgaatttc
acgacggccctgcgcccgagtaacgtgggatcggtcacttatttctggtggtttgataac
aaaaccgagcctgtggtgaccctcgatggagcggtttccttcactttcaacaaggagggg
agtcacactgttactgttcaggcttccgctggtattaccattcatcaggaccaaatcact
gtagccgtttatgattatttccgctcgcacgctttggccttttcatctaatctggacgag
ctgaaccccggggtgtctgagtggagagaagacatcggcagagttgtaaagagctacatc
gtacaggtcacaggaatcagtgaggatcagctcttggtcacggtgaatccgggtttaccg
gctacagctgaggtgtttattgtaccggagcggaggtcaggaggcagagccatgaacgat
aaatggacccacctcgaccagctctctcaggtgctgctgagtgctctgaaccaagatctg
gtccagttcgtgctcaggccgggggtgcaggtgaatgtgtttgccacacggctgtctcca
gctcctcttgtggacagcagtgacaatggctacagcagcactgcggtcatcatgctcgtg
tcagtggccctgatgggcttggtcatctttgtaatatataaatttaaaaggaagatccca
ggcatgaacacatacacggcagagcagccggataaagaacaagaggtcatccccacggtg
acctccatagccgtcccaaaccctgagggggacgatctgacctcactggattgtgtggat
acacagctgaactcaaaaaacagaggctacctgccatctcacacagacatcaacctctct
gatgaagcgccccatgtgttttaa
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