Kryptolebias marmoratus (mangrove rivulus): 108243552
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Entry
108243552 CDS
T05608
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108243552 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108243552 (ddx3xa)
03041 Spliceosome [BR:
kmr03041
]
108243552 (ddx3xa)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108243552 (ddx3xa)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108243552 (ddx3xa)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108243552 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
108243552 (ddx3xa)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108243552 (ddx3xa)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108243552 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
108243552
NCBI-ProteinID:
XP_017284568
UniProt:
A0A3Q3AEV1
LinkDB
All DBs
Position
LG6:complement(26410096..26426442)
Genome browser
AA seq
751 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAALDLNSADGQGGGSGRRYIPPHLRNKDASKNAGNAYSAGRQCG
YSVAPVNFFSSKQCPQPWQAECQQTQRNNCTSGWDDCHIGYPRLASQELAFYHAYTGGWR
NRCDSPGWDGGRTNGYVNGFHDNRTNGGFGGRGPPRNDRGFGGYENKDGGWGGPPRDAAY
NSFGGRNDRSKSTYFNDRGAGSRGRYERGGFAGGGNSRWAEDSREDDWSKPTAPNERLEN
ELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVDMGEIIMGNITLSRYTRPTPVQK
HAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGDALQTSKNSGQDNGRYGRRK
QYPLSLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATP
GRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTMMFSAT
FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRSFLLDLLNATGKDSLT
LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG
LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAK
QEVPSWLESLAYEHQHKSSSRGRSKRFSGGFGARDYRQTPGGSGGFNSNRAGRSAGGNRG
FGGGGFGGNFYNSDGYGGNYNHSGSVDWWGN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgttgtcgttgataatccacacggtctagatcagcagcttgctgccctagac
ttaaactctgctgacggacaaggcggaggaagtggtaggcgttacattccacctcactta
aggaacaaagatgcttccaaaaacgcaggaaatgcttattccgctggtagacagtgcggt
tattcagtggcacccgtaaatttcttttcatctaagcagtgcccacaaccatggcaggct
gagtgccagcaaacacagagaaataactgtacttcaggatgggatgactgtcacattggt
tacccaagactggcctctcaagagcttgccttttaccatgcctacactggtggttggcga
aacagatgtgattcacctggatgggatggcggacgcaccaatggatatgtgaatggtttc
catgacaaccgcacaaacggtggttttggagggcgtggacctcctcgcaatgatagaggg
tttggaggttatgaaaacaaagatggtggctggggcggacctcctagggatgctgcctac
aacagctttggagggcgaaatgatcggtccaagtctacatactttaatgaccgtggagct
ggctcaagaggaaggtatgagcgtgggggctttgctggtggaggaaatagccgctgggcg
gaggactccagagaggatgactggtccaagcccactgcccccaatgaacgtctggaaaat
gagcttttctctggaagcaacactgggataaactttgagaaatatgatgatattcctgtg
gaggctactggatccaactgccctccccacattgagagtttccacgatgtggacatgggg
gagattatcatggggaacatcaccctgagtcgttacactcgtcccacccctgtccagaag
catgctattcccatcatcaagaccaagagggacctgatggcctgcgctcaaactggctct
ggtaagactgctgccttcttgctcccagtgctgagtcagatttacacagatggaccagga
gatgctctgcagacctcaaagaacagtggacaggacaatggaaggtatggccgtcgtaag
cagtatcccctctcccttgtcctggctccaaccagagagctggcattacagatctacgat
gaggcgaggaagtttgcctatcgctctcgtgtgcgtccctgcgtggtttatggtggtgct
gatattggccagcagatcagggacttggagaggggctgtcatctgttggtggccacacca
ggacgtctggttgacatgatggagaggggcaagatcggtctggatcactgcaattacttg
gtcttggatgaggctgaccgcatgttggacatgggtttcgagccccagatcagacgaatt
gtggagcaagatacaatgccaccaaaaggaattcgtcagaccatgatgttcagtgccact
ttcccgaaagagattcagatcctggctcgtgacttcctggaggactacatttttctggca
gtaggccgtgttggctccacttcagaaaacatcacccagaaggtggtctgggtagaggag
actgacaagaggtcctttcttctggacctgctcaacgccacaggtaaagactctttgact
ctagtgtttgtggaaaccaagaaaggagctgatgctctggaagactttctttatcgagag
ggctacgcctgcaccagcatccatggtgatcgatctcagagagaccgggaggaagctctg
catcagttccgctctggacgctgcccaatcttggtggctacagctgtggctgctcgcggt
ttggacatctccaacgtaaagcatgttattaactttgatttgcccagtgacattgaggaa
tacgttcaccgtattggccggacgggacgtgtgggcaaccttggtctggccacgtcgttc
tttaacgacaaaaacagcaacataaccaaagatttgctggacatcctggttgaggccaag
caggaggttccttcttggcttgagagcctggcctacgagcaccagcacaagagcagcagc
cgtggccgctctaagaggttctcaggcggatttggagccagagactaccgtcagacacca
ggcggttctggaggcttcaacagcaaccgtgcagggcgcagcgctggaggaaaccgtggc
tttggtggaggtggcttcggtggcaacttctacaacagtgatggctatggaggaaattac
aaccactctggtagtgtggattggtggggaaactag
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