Kryptolebias marmoratus (mangrove rivulus): 108243844
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Entry
108243844 CDS
T05608
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108243844
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108243844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
Prok-RING_4
MRP-S31
zf-RING_11
Gp58
FapA
Motif
Other DBs
NCBI-GeneID:
108243844
NCBI-ProteinID:
XP_017285028
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Position
LG20:complement(2050516..2053362)
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AA seq
565 aa
AA seq
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MAQKGDQLDQETISCSICLDLLKDPVAIPCGHSYCMSCIKDHWDGEDRKGIYSCPQCRED
FTERPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDFCSGRKLKAIKSCLFCL
ASYCEKHLQPHYDSAAFQKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCSVDE
HKGHDTVSAAAERAERQRELEVRRQTIQQGIQDREKDVKLLQQEVEAINHSADKTVEDNE
KIFSQLIRLIQKRSSDMKQQIRSQQETEVSRVKELQEKLEQEITELKRRDAELKQLSHTE
DHNQFLHNYPSVSALSESPHSSSIKTKPLRYFEDVTAAVKELRDKLEDILRDEWTNISLT
FPEAEVSLPQPEPEPESRAEFLKYSCEITLDPNTVNRQLLLSEGNRKVTKMNHPQFYSDH
PDRFTEWQQVLGRESLTGRHYWEVKLRGVGEAYVAVSYKDISRAGELNECSFGHNDKSWA
LCCPSGQFEFWHNNNKTSISGPGSSRIGVYLDHRAGVLSFYRVSKTMTLLHRVQTTFTQP
LHVGVKIGWWFVLSRKSSVEFCKVK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcagctggaccaagaaaccatctcctgttcgatctgtttggat
ctactgaaggatccggtggctattccctgtggacacagctactgtatgagctgtattaaa
gaccactgggatggagaggatcggaaaggaatctacagctgccctcagtgcagagaggac
ttcaccgagaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgctctggaagaaaactgaaagccatcaagtcctgtttgttctgtctg
gcctcctactgtgagaaacaccttcagcctcattatgattcagctgcatttcagaaacac
aagctggtggagccctccaagaacctgcaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaagagctgagaggcagagagagctc
gaggtgaggcgacaaacaatccagcagggaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcactctgctgataaaacagtggaggacaatgag
aagatcttctctcagctgatccgtctcatccagaagagaagctctgatatgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggagagatgctgagctgaagcagctctcacacacagag
gatcacaaccagtttctccacaactacccctcagtgtcagcactcagtgagtctccacac
tcatccagcatcaagaccaaacctctgagatactttgaggacgtgacagcagctgtgaag
gagctcagagacaaactagaggacattctgagggacgaatggacaaacatctcactgact
ttccctgaagcggaggtttcactgccacaaccagaaccagaaccagagagcagagctgaa
ttcctaaaatattcctgtgaaatcaccctggatccaaacacagtaaacagacagctgtta
ctgtctgaggggaacagaaaggtgacaaagatgaatcatcctcagttttattctgatcat
ccagacagattcactgaatggcaacaggttctgggcagagagagtctgactggacgtcat
tactgggaggtgaagttgagaggggtaggagaagcttatgtagcagtttcatacaaggat
atcagcagagcaggggagttgaatgaatgttcatttggacataatgataaatcttgggct
ttatgttgtcccagtggacaatttgaattttggcacaacaacaataaaacctcgatctca
ggtcctggttcctccagaatcggagtgtacctggaccacagagcaggtgttctgtccttc
tacagagtctctaaaaccatgactctcctccacagagtccagaccacgttcactcagccg
ctccacgtcggagttaagattggttggtggttcgttttgtcacgaaaaagtagcgttgaa
ttctgtaaagtcaaatag
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