Kryptolebias marmoratus (mangrove rivulus): 108246166
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Entry
108246166 CDS
T05608
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108246166
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108246166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
PRY
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
MRP-S31
Gp58
FapA
Motif
Other DBs
NCBI-GeneID:
108246166
NCBI-ProteinID:
XP_017289065
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All DBs
Position
LG20:977656..979900
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AA seq
555 aa
AA seq
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MAQKGDQLDSEAFSCSICLDLLKDPVTTSCGHSYCMSCIKDHWDQEDHKGIHSCPQCRET
FIPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDFCSGRKLKAIKSCLFCL
ASYCEKHLQPHYDSAAFQKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCSVDE
HKGHDTVSAAAERAERQRELEVRRQTIQQGIQDREKDVKLLQQEVEAINHSADKTVEDNE
KIFSQLIRLIQKRSSDMKQQIRSQQETEVSRVKELQEKLEQEITELKRRDAELKQLSHTE
DHNQFLHNYPSVSALSESPHSSSIKTKPLRYFEDVTAAVKELRDKLQDILRDEWTNISLT
VPEAQVLLSEPEQESRDEFLKYSCEISMDPNTANRYLVLSLQNRKITAVAQFESYHGPSD
KFTQWWQVLSRESLTGRCYWEVDWRGKGVSVAVSYKNISRAGSESKFGYNDKSWTLNCSQ
NNFTFWHNNISTSISGPGSSRIGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAGV
GVYWPGVSAELCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcagctggactcggaggccttttcctgctcgatctgtttggat
ctactgaaagatccagtgacgacttcatgtggacacagctactgtatgagctgtattaaa
gaccactgggatcaagaggatcataaaggaatccacagctgccctcagtgcagagaaact
tttataccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgctctggaagaaaactgaaagccatcaagtcctgtttgttctgtctg
gcctcctactgtgagaaacaccttcagcctcattatgattcagctgcatttcagaaacac
aagctggtggagccctccaagaacctgcaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaagagctgagaggcagagagagctc
gaggtgaggcgacaaacaatccagcagggaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcactctgctgataaaacagtggaggacaatgag
aagatcttctctcagctgatccgtctcatccagaagagaagctctgatatgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggagagatgctgagctgaagcagctctcacacacagag
gatcacaaccagtttctccacaactacccctcagtgtcagcactcagtgagtctccacac
tcatccagcatcaagaccaaacctctgagatactttgaggacgtgacagcagctgtgaag
gagctcagagacaaactacaggacattctgagggacgaatggacaaacatctcactgact
gtccctgaagcgcaggttttactgtcagaaccagaacaagagagcagagatgaattctta
aaatattcatgtgaaatctcaatggatccaaacacagcaaacagatatctggtactgtcg
ctgcagaatagaaaaattacagcagtagcacaatttgagtcttatcatggtccctcagac
aaattcactcaatggtggcaggtcctgagcagagagagtctgacgggacgttgttactgg
gaggtggattggagaggaaaaggagtttctgtagcggtttcatacaagaacatcagcaga
gcaggaagtgaatctaaatttggatataatgacaaatcatggactttaaattgttcacaa
aacaattttacattttggcacaacaacatctccacctccatctcaggtcctggttcctcc
agaatcggagtgtacctggaccacagagcaggtgttctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacgttcactcagccgctccacgctggagtt
ggagtttactggccgggagtctctgctgagctctgtaaactcaaatag
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