Kryptolebias marmoratus (mangrove rivulus): 108247371
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Entry
108247371 CDS
T05608
Symbol
bap1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108247371 (bap1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108247371 (bap1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108247371 (bap1)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108247371 (bap1)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108247371 (bap1)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
108247371 (bap1)
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
108247371 (bap1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108247371 (bap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
108247371
NCBI-ProteinID:
XP_017290921
LinkDB
All DBs
Position
LG4:12868196..12876008
Genome browser
AA seq
742 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQSPVYGFIFLFKWIEERRSRR
KVNTLVDETSVIDEEIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRIKAFTK
GFSPESKGYAIGNAPELARAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMK
YESKLEILKKNRQTILEGLQKMIRLTQTEHIHDKKQQDSSSPDESTPAIKKEADAGPGTS
QGCSSDSVDDSGAQSKDGSSSSGATKVMGKPPVPIAQQVTSPNPIVQRLPAFLDNHNYAK
SPMQEEEDLAAGVGRSRISGPPQHQYSDDEDDYDDDEEEVTPTASTSTRQALFRRKPSLR
LRTSRTGTGMESQIALNVLAEKLKKEAQRKDALNTPLSVRTEGRTGGICITSASQPSPTP
SNESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEMLRLDSRHNRAV
RELGPSVSVALLHLQEDGVIHALPPSGDLSPEGTKVCTPEKVKVKEKADEKDGVKEGHEG
ASVEVKKEEENKEGAEVKPGKEKLNVTESGADSKAPGDKYSPKELLALLKCVEADIANYE
VSLKEEIEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIG
RLHKQRKPDRRKRSRPYKAKRQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagggtggctggagctcgagagtgatccaggcctgttcactctgctggtggaa
gattttggtgttaaaggtgtgcaagttgaggaaatctatgatcttcaaagcaagtgtcaa
agtcctgtttatggcttcattttcctgtttaagtggattgaagagcgtcggtccaggaga
aaggtcaacactttggtggatgagacttcggtcattgatgaggaaattgtaaatgatatg
ttttttgcacatcagttgataccaaactcgtgtgccactcacgctctgctgagtgtcctt
ctgaactgcagtggagttgagcttggcaccacactcagtcgcataaaagcttttacaaaa
ggcttcagtccagaaagcaaaggctatgcaataggaaatgccccagagcttgcccgagca
cataacagccatgccagaccggagcccaggcaccttccggagaaacagaacgggatcagc
gcagtgcggaccatggaagccttccactttgtcagctatgtgccaatcaaagaccgtctc
tttgaacttgatggactcaaggcttaccccattgaccacgggccctggggtgaggatgag
gaatggaccgataaggctcgtcgtgttatcatggagaggattggactggccaccgctggc
gagccgtaccacgacatccgcttcaacctgatggcagtggtgcctgaccgcagaatgaag
tacgagtccaaactggaaattctgaagaagaatcgacagactatcctggagggtttgcag
aagatgatccgactcactcagactgagcacattcatgacaaaaagcagcaggactcttcc
tccccagacgaaagcacccctgccatcaagaaagaagcagatgcaggcccaggcacttcc
caaggatgctcttcagattcagtggatgattcaggggcccagtccaaggatggatccagc
tcctcaggagccactaaagtcatgggaaaacccccagtccccatcgcacagcaagtcacc
agtccaaacccaattgttcagcgcctgcctgccttcctggacaaccacaactacgccaag
tctccaatgcaggaggaggaagatcttgcagcaggcgttggtcgctctcggatctcaggc
ccaccccaacaccagtactcagatgatgaagatgactatgatgacgatgaggaagaagtg
acacctactgcaagcacttccaccaggcaagcattatttcgacggaaaccaagtcttcgc
ttaagaacaagccggaccgggacgggaatggagagccagattgccctcaatgttttggct
gaaaaactgaaaaaagaggctcaaagaaaagatgctttaaatacccccctatctgtgcgc
accgaaggtcgcaccggggggatttgtatcacgtctgcctcacagccgtcccccacaccg
agcaacgaaagcaccgacacggcctcggaaattggcagcgctttcaactcccccctccgc
tcgccggcacgctcccaggctgccacgcgcccgtcgagtccagttgcctcccatctgtcc
cgagttctgtttggagaagatgaaatgctgaggctagactccagacataaccgtgctgtg
agagaactcggcccctctgtcagcgtagcgctgctacacctacaggaagacggagtcata
catgctctccctccatctggagatttgtcaccggagggcactaaagtttgtactccagaa
aaagtaaaagtcaaagagaaagcagatgaaaaagatggtgtgaaggagggacatgaagga
gcatcagtggaggtgaagaaagaagaggagaacaaagagggagcagaggtgaaacctggc
aaggagaagctcaatgttacagagtctggtgcagacagcaaggcccccggggataagtac
tctcctaaagagctgctcgcgctgctcaagtgtgtagaggctgacattgccaactacgaa
gtgtctctgaaggaggaaatcgaaaagagaaaaaaatacaagattgatgatcagaggagg
acgcataattatgacgagtttatctgcacctttatatcaatgctggcccaagaaggcatg
ctggccagtctcgtggagcaaaacatttctgtgcgccgtcggcagggagttagcatcggc
cgtttgcacaagcagaggaagcccgaccgaaggaaacgctcccggccttacaaagccaaa
cggcagtaa
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