Kryptolebias marmoratus (mangrove rivulus): 108248398
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Entry
108248398 CDS
T05608
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108248398 (tyw1)
Enzymes [BR:
kmr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
108248398 (tyw1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108248398 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Lipoprotein_16
Motif
Other DBs
NCBI-GeneID:
108248398
NCBI-ProteinID:
XP_017292651
UniProt:
A0A3Q3BJQ1
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All DBs
Position
LG2:1486320..1521288
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AA seq
749 aa
AA seq
DB search
MLILLLTVCLVSGFGSPSDAEDRQDVQRSGGKYLVWIWTNRMFVYSAAALVFGTWFLLKV
ALKRTNSTEAAAPRDSKAAKNVSRSAKDPEVHVSGVKIFFGSQTGTAKGFAKELSEEVQA
LGTPAEVIDMKDYDPDDRLADECVSKSVCVFLVATYTDGQPTENAEWFCKWLEEASTDFR
YGKTFLQGLRYAVFGLGNSVYVGHYNTVGKNIDKWLWMLSATRIMSRTEGDSDVVKSRNG
SVQADFQAWKLRFLSRLQALAKGEKKSCSGNCKKGGSCKNKKKHRPDEEEKASSHDNSSE
VDLIDSSSDDDESGFLDEKRSGSVVDVEDLGNIMSSVKKAKSKDKDEEDQVVRLSKLNGV
KKMEDEEERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIE
SHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQDSLEKHQNMIRQFRGV
PGVKPDRFEEGLAVRHCALSLVGEPIMYPEINAFVRLLHRRRISSFLVTNAQFPEEIRSL
APVTQLYVSVDASTKDSLKKIDRPLFKDFWPRFLDSLRALGEKRQRTVYRLTLVKAWNVE
EMQAYSELIALGQPDFIEVKGVTYCGESSASSLTMANVPWHQEVVAFVQQLADMLPQYEI
ACEHEHSNCLLIAHTKFKVDGEWRTWIDYDRFQELVQAHEDSGGQQSFSALDYMARTPSW
ALFGAREQGFDPADTRFQRRNRTKDISGC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgttaattttacttttaacggtttgtcttgtttcgggattcgggtctccttcggacgct
gaagaccggcaggatgtccagagatccggggggaaatatctggtttggatttggaccaac
aggatgttcgtttattctgctgctgcacttgtttttgggacctggttcctactgaaggtg
gcgctaaagagaacaaactccacggaagctgctgctccacgggactctaaagctgcgaag
aacgtcagccgctctgccaaagatccagaggttcacgtgtcgggagtgaaaattttcttt
ggctcacaaactggaaccgcaaagggttttgctaaagagctgtccgaggaggtccaggcg
ttaggaacacctgctgaggtgatcgacatgaaagactacgatccagatgatcgactcgca
gacgagtgtgtcagtaagtcagtctgcgtcttcctcgtggccacctacactgacgggcag
cccacagagaacgccgagtggttctgcaagtggctggaagaagcatccaccgacttcaga
tacggaaagaccttcctccaaggcctcagatatgccgtgttcggcctcggaaactccgtc
tacgtcggtcactataacacggtgggtaaaaacatcgacaagtggctgtggatgctgagc
gccacgcggatcatgagcaggacggagggcgactccgacgtggtgaaaagtcggaacggc
agcgtccaggcagacttccaggcctggaagctgaggttcctgagccgccttcaggctctg
gcgaaaggagagaagaagagctgcagcgggaactgtaagaagggaggatcctgtaagaac
aagaagaaacaccgaccggatgaagaggagaaggcttcatcacacgataacagctctgag
gtggatttaattgactcgagcagcgatgacgatgagtcgggcttcctggacgagaagagg
tccggttcagtggtcgatgtggaggatctgggcaacatcatgagcagcgtgaagaaggca
aagagcaaggacaaggacgaagaagatcaggtggtgaggctgtccaaactcaacggcgtg
aagaagatggaggatgaagaggaaagaagagagatgatcactcctgccctgagagaagct
ctgacaaagcaaggatataaactaattggaagtcactcaggagtgaagctctgtcgatgg
actaagtctatgttaagaggaagaggaggttgttacaaacacactttctatgggattgag
tcccaccggtgcatggagacgacccccagcctggcctgcgctaacaagtgtgtcttctgc
tggagacaccacaccaacccagtgggcacagaatggcgctggaaaatggaccctgcagag
aaaatcctgcaggattccttggagaagcatcagaacatgattcgacagtttagaggtgtc
cccggagtaaaacctgatcggttcgaggaggggttggctgtcagacactgcgccctgtcc
ttggtgggagagccaatcatgtatcctgaaatcaacgccttcgtccgcctcctccaccgg
cgccgcatctccagtttcctcgtcaccaacgctcagttcccagaggaaatcaggagcctg
gcgccggtcactcagctgtacgtcagcgtggacgccagcactaaagacagtctgaagaag
atcgaccgaccacttttcaaggacttctggcctcggttcctcgacagcctccgagctctg
ggggagaagagacagaggacggtgtacagactgacgctggtgaaggcctggaatgtggag
gagatgcaggcctactcggagctgatagctttaggacagcccgacttcatcgaagtcaag
ggcgtgacttactgcggcgagagctctgccagcagtctgaccatggcgaacgttccctgg
caccaggaggtggtcgccttcgtccagcagctggccgacatgctgcctcagtacgagatc
gcctgcgagcacgagcactccaactgtttgctcatcgcccacaccaagtttaaggtggac
ggggagtggcggacctggatcgactacgaccgtttccaggagctggttcaggctcacgag
gacagcggaggacagcagagcttctcagccttggactacatggcccggacccccagctgg
gctctgtttggagctcgggagcagggttttgatcctgccgacacacgttttcagcgccgc
aacagaaccaaggacatctccggctgctga
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