Kryptolebias marmoratus (mangrove rivulus): 108251704
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Entry
108251704 CDS
T05608
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108251704 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108251704 (usp47)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108251704 (usp47)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108251704 (usp47)
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108251704 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
DUF5622
Motif
Other DBs
NCBI-GeneID:
108251704
NCBI-ProteinID:
XP_017297589
LinkDB
All DBs
Position
LG15:complement(7748815..7772112)
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AA seq
1382 aa
AA seq
DB search
METVPSEENQFVPKEDVFWRCRQKVFDEMKRISQIQNAAEEPRVLCIIQDTTSAKTVNER
LTLNLPASTTLSKLYEDVAHKAGYVNGTFDLAWGNITGMAPLEHNSEMSLSDSGFEPGKK
NFLQLTDKDGEQPQIASDESGTAESSGLDDSSQERFIGPLQRDGSAGGSGDYSSPSYSYS
SILSKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYNWEFEESEEEPVTSIPYQLQ
RLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLI
NQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLD
GPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDM
SPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERALK
PKSLLTFELFSVMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSS
GSRVYYSSAFASSTNAYMLIYRLKDPSRNAKVLAVEDFPEHIKSLVQKEKESEEQEKRQR
EIERNTCKIKLFCMHPVKMMMESKLEVHKDKTLKEATEMSYKLMELEGVIPLECCRLVKY
DEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVV
DLKTETIAPPISVRAYLNQSITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTL
KAEGFFRSNKVFVESSELSDHQVPFTDSLLWKLLDRHGNTIRLFVLLPEQSPGTLANRTV
CQKVGEDSDGPFEGSKGNRKSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSDASDFEH
IESPTQEADSNSSLCVAADNRELENRIRGAPGGSGGASSDTENQFVCEERSDSEVNNDRS
TSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDS
GTDSEYDDNGKSKAEAQYLYFRAEPYSQDEASWETQKCLVVHVDKRITLAAFKQRLEPYV
GVMSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVN
EPEPCKFLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDY
HVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAILTRRWSPAAMKLGPFQEVILESSSVD
ELKEKLSEISGIALENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGA
VVFYRDSREEPLELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVRDSG
QD
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggtgcctagcgaggagaaccagttcgtacccaaagaggacgtgttttggaga
tgcagacagaaagtttttgatgaaatgaagaggatttctcagatacagaacgcagctgag
gagccccgagtgctgtgtataatccaggacaccaccagcgcgaaaacggtcaacgagagg
ctgaccctcaacttgcctgcttccacgactctttccaaactttatgaggacgttgcgcac
aaagctggatatgtgaatggcacctttgacctcgcctggggaaacattacaggcatggca
ccactggaacataacagtgagatgtccctctcagattctgggtttgagcccgggaagaag
aatttccttcagcttacagataaagatggagagcagccgcagattgcatcagatgagtca
ggaactgcagaaagcagtggactggatgacagctcccaggagcgatttattggaccccta
caaagagatggtagtgcaggtggcagcggggactacagcagtccatcgtactcctactcg
tctatcctcagcaaatctgagacaggttacgtaggcttggttaaccaagctatgacgtgt
tatttgaacagtcttctgcaaacactgtatatgaccccagagttcagaaatgcactctac
aactgggagtttgaggagtcggaggaggagccagtcaccagtattccgtaccagctgcaa
cggctgtttgttttgctgcagactagcaagaaacgagcgattgaaaccactgatgtgacg
aggagctttggctgggatagcagtgaggcctggcagcagcatgacgtccaggaactgtgc
agggtcatgtttgatgccctggagcagaagtggaagcaaacagaacaggctgatctgatt
aaccagctgtatcaaggaaagttgaaagattatgtgcgctgtttggagtgcggctatgag
agctggagaatcgatacttacttggacatccctcttgtgatcagaccctttggagccagc
caagcctacgggagtgtggaggaggctttgcaggctttcatccagccggaaactctggat
gggcccaaccagtacttctgtgaacgctgcaaaaagaaatgtgatgctcgaaagggtctg
agatttctgcactttccctacctgctgacattacaacttaaaaggtttgatttcgactac
accactatgcatcgcattaagcttaatgaccgcatgactttccctgaggagcttgatatg
agtccattcatcgatgtagaagatgagaagtcgcctcagacagagagctgcactgatagt
ggtgcagagaatgaaggcagttgccacagcgaccaaatgagcaacgatttttccactgat
gactgtgtggatgagggcatctgcttggacagcaccagcagcacagagagggcgttgaag
ccaaagagcttgctgacctttgagctgttctctgtcatggtccattcgggaagcgctgca
ggtggtcactattacgcttatatcaagtccttcagtgatggccagtggtacagtttcaat
gatcaacatgttagtaagatcacccaggatgatattaggaagacatatgggggatcctca
gggagcagagtctattattccagtgcctttgcaagttctacaaatgcatacatgctgatt
tatagactgaaagatccctcaaggaatgcaaaggttttagctgtggaagactttccagag
cacataaagagtctggttcagaaggagaaagagtctgaagagcaagaaaagcgccagagg
gagattgagcgcaacacttgcaagatcaagctcttctgcatgcatcctgtaaagatgatg
atggagagcaagttggaagttcacaaagacaaaactctcaaagaagcaacagaaatgtcc
tacaagctgatggagctggaaggagtcattcctctggagtgctgtcgcttggtaaagtat
gatgagttccatgagtatctggagcgatcatacgagggcgaggaagacactccgatgggc
ctcctccttggaggtgtcaagtcctcatacatgtttgacctgcttcttgagactcgcagg
ccagaccaagtgttccagccttacaaacctggagaagtgatggtgaaggttcatgttgtt
gatctgaagactgagaccatcgctcctccaatcagtgttcgagcgtacttgaaccagtcg
atcactgagttcaaacagcttattgcacaggctacggggctttctgcagaaaccatgcga
gtggtcttggagcgctgctataatgacctccggctcctttatgttccaaacaagacgctt
aaagctgaaggattctttaggagtaacaaggtttttgtagagagctctgagttgtcagat
catcaggttccttttaccgactcgctgttgtggaaactcttggatcgtcacgggaatacg
atccgactgtttgtcttactccctgagcagtctcctggtactttggctaatagaactgtt
tgccaaaaagtaggagaagactccgatggaccctttgagggttcaaaaggcaacaggaag
tctgtggaagcgattctcgaggaaagcacagaaaaactgaaaaacctgtctttgcagcag
cagcagggttccagcacaagtgacagccaaaaaagctctgatgccagtgactttgaacat
attgaatccccaacccaagaagctgactcaaactcttcgctctgtgtggctgcagacaac
agagagttagagaaccggatcagaggcgctcccggcggcagcggaggtgcctcttctgac
acagagaaccagtttgtctgtgaggagcgctcggactctgaggtgaacaatgaccgtagc
acaagctcagtggacagcgacattctgagctccagccacagcagtgacacgctgtgtaac
gcagacagcggccccatccagctggccaacggcttggattcacacagcattacaagtagc
cgacgctccaaagcccacgaggggaaaaaggagacgtgggacactgccgaggaagactct
gggacagacagcgagtatgacgacaatgggaagagcaaagcagaagctcagtacttgtac
ttcagagcagagccttattcccaggatgaagcctcgtgggaaacacagaaatgtttagtg
gttcacgtggacaagagaataacattagcagcattcaaacagaggctggagccttatgta
ggtgtaatgtcatcccagttcaaggtgtttcgggtttatgccaacaaccaggaatttgag
agcgtacgtctcaatgaaacactttcatcattctctgacgataacaagataactattcga
ctaggaagagccctgaaaaagggtgaatacagagttaaagtgtatcaacttctagtaaat
gaaccagagccctgcaagttcctggtggacaccgtgtttgcgaagggcatgactgtcaga
cagtccaaggaggagctgcttcctcagttaaaagagcagtgcaagctcgacctcagcatc
gacagggttcgtctcagaaaaaagacgtggaagaatccaggcaccgtgtttttggattac
cacgtctatgaagaagacatcagcatttcttccaactgggaggttttcttagaagtcctt
aatgaaccagagaagatgaagtccatgtcccagctggccatcctgactcgacggtggagt
ccggctgccatgaagctggggcctttccaggaggtgattctggagagcagcagcgtggat
gaactcaaggaaaagcttagtgaaatcagtggtattgctcttgaaaacctggagtttgca
aagggtagaggaacatttccttgtgacatatccgtgttggagatccatcaggatttggac
tggaacccgaaggtgtccacccttaatgtgtggcctctttatatctgtgatgatggagct
gtggtcttctacagggacagcagggaggaacctctggagctctcagaggaagagcgtaac
gagctgatgaagaaggagagcagccgactgctcaagacgggacatcgtgtcagttactca
ccgcgaaaagagaaggcgctgaagatctacctggacgggggtcctgtgagagactcgggg
caggactga
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integrated database retrieval system
