Kluyveromyces marxianus: KLMA_70449
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Entry
KLMA_70449 CDS
T05269
Symbol
SPB4
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
kmx
Kluyveromyces marxianus
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmx03009
]
KLMA_70449 (SPB4)
Enzymes [BR:
kmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLMA_70449 (SPB4)
Ribosome biogenesis [BR:
kmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
KLMA_70449 (SPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
34718189
NCBI-ProteinID:
XP_022678046
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All DBs
Position
7:925296..927089
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AA seq
597 aa
AA seq
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MARSLSWDDLKCDIEPWIRTAIDAMGFETMTPVQASTIPLFSGNKDVVVESVTGSGKTIA
FVIPVLERLIKEEANSPKFKKSHFHSLIISPTRELASQIQSVIEEFLKYYPDDQYPIRSQ
LIVGTGDSTVRDDINRFMDNRPQILVGTPGRILDFIQKSNVKTSSCGTVVLDEADRLLDL
NFQKDVETILKLLPKQRRTGLFSATIESAGAQIFKTGMRNPVKVAVKSHSSAPSSLSINY
IVTPPEDKLQLLLTLLNNYRFKKCIVYFPTCISVTYFYAFINYLKSIDLITEDISIFSLH
GKLQTQSRMKTLNSFTTSLKNSVLFTTDVAARGIDIPDVDLVIQLDPPTDSDIFIHRCGR
TGRANRVGKAIVLLNEGREEDYIPFLEVKNVILEEESVKITPIDTLSQTFKEWIMQDRAR
FDHGIRAYVAFIKYYSKHSASSIFRLQTMNFVGIAKFYGLLRLPKMPEITQYALASSIPE
GGWLVSPPIDLDTFSYMDKRKEKERLQELKNIQHINDKKKLKSELKKKNMAWSDKKLSKD
AKIERKAAMAAKRKAIEEKLLQEGNESEGEVEQDWKDLVRQNKKKKHNIIQGSFGDL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatctctatcttgggatgacttgaagtgtgatatcgaaccatggattcgcact
gccatcgatgccatgggttttgagacaatgacacctgttcaagcttcaactattccgtta
ttttctggaaacaaagatgtggtagttgaatccgttactggctcaggaaaaactattgct
tttgttattcctgtgttagaacgattaataaaggaagaagcaaactctcctaagtttaag
aaatcgcacttccactcattaataatttcaccaacaagggaattggctagccaaatacag
agtgtaattgaggaatttttaaaatattatccagatgatcaatatccaatacgttcacag
ttaatcgtgggtacgggagattccactgttagagatgatattaataggtttatggataat
cgaccacagattttggtcggaactccagggagaattttagacttcattcaaaaatcaaac
gtcaaaacttcatcatgtggcacagttgttttagatgaagcagatagattattggattta
aactttcagaaggatgtagaaaccattctcaaactattgccaaaacaaagaagaaccgga
ctcttttccgctactatcgagagcgctggagcccaaatatttaaaactggtatgagaaac
cctgtgaaggtggctgtgaaatctcattcaagtgctccttcatctctttcaataaattat
attgttactcctccagaagataaactgcaacttcttttaactctattgaacaattacagg
ttcaagaaatgcattgtttatttccctacttgtatctccgtgacatacttttatgcattc
atcaattatttgaaaagtattgatctcattactgaagatataagtatattctctcttcat
ggtaagttacagacccagtcaagaatgaaaacgctcaatagcttcactaccagtttgaaa
aactctgttttatttactacggatgtggctgctagaggtatcgatattccagatgttgat
ctagttatacagcttgatcctccaactgattcagatatatttattcacagatgtggaaga
acaggtagagcaaatagagtagggaaagcgatcgttcttcttaacgaaggtagagaagaa
gactacattccatttctagaagttaagaatgtgattcttgaagaagaatccgttaaaata
acacccatagacacactctctcaaacattcaaagagtggattatgcaggacagagccagg
ttcgatcacggtattagagcttatgtggcatttatcaaatattactcgaagcattctgca
tcctctatcttcaggcttcaaactatgaactttgtaggcattgcaaagttctacggtttg
ttacgccttccaaaaatgcccgaaataacgcagtatgcactagctagtagtatccctgaa
ggaggatggttagtatccccgccaatagaccttgacacattctcttatatggataaacgg
aaggagaaagaaagactacaggagttgaaaaatattcaacatatcaatgacaagaaaaag
cttaagagtgagctaaagaagaaaaacatggcctggtctgataagaaactttcaaaggac
gctaaaattgagagaaaggctgcaatggccgcaaagagaaaggcgatagaggaaaaactt
ttgcaagaaggaaatgaatcggaaggtgaagtagaacaagactggaaagatcttgtaagg
caaaacaaaaagaaaaaacataatatcatacaaggtagttttggtgacttatga
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