Kluyveromyces marxianus: KLMA_80033
Help
Entry
KLMA_80033 CDS
T05269
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KLMA_80033 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmx03400
]
KLMA_80033 (LIG4)
Enzymes [BR:
kmx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KLMA_80033 (LIG4)
DNA repair and recombination proteins [BR:
kmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
KLMA_80033 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
Motif
Other DBs
NCBI-GeneID:
34718234
NCBI-ProteinID:
XP_022678091
LinkDB
All DBs
Position
8:complement(101612..104332)
Genome browser
AA seq
906 aa
AA seq
DB search
MSECRNFSPSPEFKWLCDELFQKIHDTSVNRHLIGKPVTVRFLEIIANFIKLWRSTVGND
IYPALRLIIPYRDKRVYNIKENTLIKALCHYLRLPKNSDTEKRLLRWKQRAPRGVKLSDF
CVEEIRKRQKDYEGPTRITIDQLNGHLDEIAQAGNGKRMGHMALLDSRAFNYCLKHMTFE
ELKFFFDILLKTRVISGLEVKFLNAWHPDAQDYLSVVSDLYVLSQRLYDPNERLRKVDLS
INISHAFEPQLAKRTHASYEHVASSLGKNFIIEEKMDGERLQIHYMNYGEQIKYLSRRGV
DFSYLYGENISKGPVSSSIKLHPNVKDCILDGEMITFDIEKDMVLPFGLVKNSAMNHVQA
EITGVSLTESHRPLFIAFDLVYLNGKSLTSLELWRRKDYLSKILTPVEKKVEIIQYHKSD
DAMDIKNSLEHAISVGSEGIVLKNLQSKYNIASRNSDWIKIKPEYLEQFGENMDLLVIGR
DQGKKDSFLCGLSVNNTENPTERPKFLSFCTIANGFSQEEFKDIERNTRGKWHIFSEEPP
DKRIFEFGTKLPYEWIYPEDSVVLEVKARAIDNKDSEKKRYRTGCTLHFGYCKQIRYDKS
WKDATSLADFEEMKEARNFYHKRTQHEVSKEKRKSSKRARINIVNISEPRRLDDPISYIF
QRCKFRIISDFFYQSRRKRISQEDLCSLVLENGGEVIYNNVDSITPEENLYIISDRLTYE
CKVLVDKGLVIVNPLWIFKSIEAGAKLPLTDEDIFAATRKEHERVMPQPNNITEKYTGYS
KIAYPESSYYNNNMNISSMPIFRFDRLKIAMIDSPSVSRAYLRKVEFTIKCHGGTIENME
NADIIVVVNELISKKELLSIRKKIAARAVNESVDSTPRIPRIVDVSWIFDSIKGHHLVDA
ENYQCL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtgccgtaacttctcaccttctccagagtttaaatggttatgtgatgaatta
tttcaaaagattcacgatacttcggttaacagacatcttataggaaagcctgtaaccgtg
cgcttcctagagattattgcaaatttcattaagctatggaggagcactgtaggtaatgat
atatacccagctttgagattaatcataccttacagagacaagagggtttataatataaaa
gaaaacactttaatcaaagcattgtgtcattatctcagattaccgaagaactcggacaca
gagaaaaggctccttcgttggaaacaacgggcaccaagaggggttaaattatccgatttc
tgtgtagaagagatcagaaagcgtcaaaaggattatgaaggtccaactaggattactatt
gaccagttaaatggtcatttagatgagattgcacaagcaggcaatggcaagagaatgggt
cacatggcactacttgactcacgagcattcaactattgcttgaaacatatgacatttgaa
gaattgaaattcttctttgatattcttcttaagaccagagtaatttctgggttagaggtt
aagtttttgaatgcatggcatccagatgcccaagattatttgagtgttgtttcagacttg
tatgttttaagtcaaagattatatgatccaaatgaaaggttaagaaaggttgatctttcc
ataaatatttcccacgcatttgaaccacaactggccaaaaggactcatgcgtcttatgaa
catgtggcttctagcttgggaaagaattttataatcgaagagaagatggatggagagagg
cttcaaatacattatatgaactacggagaacaaataaaatacctaagtcgaagaggtgta
gacttttcatatctttacggtgaaaatatcagtaaaggcccggtttcatcatctattaag
ttgcatcccaatgttaaggattgtatattggatggtgaaatgattacgttcgatattgaa
aaagatatggtgcttccattcggtctcgtaaaaaatagcgcaatgaatcatgtccaagct
gaaataactggcgtatcgctgacagaatcacataggcctttgtttattgcattcgaccta
gtatacctcaacggaaagtctttaacaagtttggagctttggagaagaaaggattatttg
agcaagattcttaccccggtagaaaaaaaagtcgaaataatacaatatcataagtcagat
gatgccatggatataaaaaattcacttgaacatgcaatctcagtagggtctgaaggaatt
gtgctcaaaaacttacaatcaaaatataatattgcaagccgaaattcggattggatcaag
attaaacctgaatatttagaacaatttggagagaatatggatttattagtgatcggaaga
gatcaaggaaagaaggactcgtttttatgtggcctctctgtgaataatactgaaaatcca
actgaaaggcctaaatttctctctttctgtacaatagcaaatggattttcccaggaggaa
ttcaaagacatagaaagaaacactaggggaaagtggcatatattctcagaagaacctccg
gataagagaatttttgagtttggaactaagttgccttatgaatggatttatccagaggat
tcagttgttttagaagttaaggctagagcaatagataacaaagactctgagaaaaaaaga
tatagaacaggatgtacgttgcattttgggtattgcaaacaaattagatatgacaaaagt
tggaaagatgcaacatcattagcagactttgaggaaatgaaagaagcaagaaatttttat
cacaaacgaacacagcatgaagtatcaaaggagaaaagaaaatcatcaaaaagggcaaga
attaacatagttaacatatctgaacctcgaagactagatgatccgatttcatacattttt
cagagatgtaaattcagaataatttctgactttttctatcagtcgagaaggaaacgaatt
agccaggaagatttatgttccttggtattagaaaacggtggagaagtcatttacaacaac
gttgatagtattacacctgaagagaacctctatataattagcgataggctgacttatgag
tgcaaggtattagttgacaagggcctcgtaattgtgaatccgctatggatttttaagtca
attgaagcgggcgctaaattgccattaactgatgaagacatatttgctgctacgagaaag
gaacatgagcgtgtaatgccacaaccaaataatataactgaaaagtatacgggctattca
aagatagcatacccagaatcttcatattacaataataatatgaatatatccagtatgccg
atcttccgctttgatagattgaaaatagcaatgatagattcaccaagtgtttcaagagct
tatctgagaaaagttgaatttaccataaaatgccatggaggaacaatagaaaatatggaa
aatgcagatataatagtagtagtcaacgagttgatatcgaaaaaggaacttctctcaatt
cgtaaaaaaattgcagctagagcagttaatgaatcagtagacagcacaccccgaatccca
agaatagtagatgtttcgtggatttttgattccataaaaggacatcacctggttgatgct
gaaaactatcaatgtttgtaa
DBGET
integrated database retrieval system
