Kazachstania naganishii: KNAG_0A04300
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Entry
KNAG_0A04300 CDS
T08174
Symbol
KNAG0A04300
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
kng
Kazachstania naganishii
Pathway
kng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KNAG_0A04300 (KNAG0A04300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kng03021
]
KNAG_0A04300 (KNAG0A04300)
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0A04300 (KNAG0A04300)
Transcription machinery [BR:
kng03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KNAG_0A04300 (KNAG0A04300)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
KNAG_0A04300 (KNAG0A04300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
VHS
Motif
Other DBs
NCBI-GeneID:
34523742
NCBI-ProteinID:
XP_022462353
LinkDB
All DBs
Position
1:586015..587919
Genome browser
AA seq
634 aa
AA seq
DB search
MDEDTRATVKEFEDVLKELTLNSRPIITTLTKMAEENISCAQYFVHLLEARIEKCVPTQK
LYAFYALDSICKNAGSPYTIYFSKNLFSMYRKTYLIVDNNTRTKMINLFRSWLEPTTATG
EPVFDKGTLDRIESFLIKASALHQKNMESMLPTPTISLLLKEIDKLTMLTEERLRDNKAD
AKLATKLEVLNQLKAVLQREKLGVPALKQVQLQLQQVFAQDQQYLQDKFVHQQKQQLQQQ
QLQQQKQQRQRGAGMMGTPDILQGSKSPSKSGTPIIPLFNNFSNQPSKTAGAATNASASL
FGSMSSILSPNNFAEMEKTNRIAKIKNLYDELNKEGLLYVPKRESIVTLYDSLNTKNNEN
NMQQIKNNLPPIPVLTSIIFDCKAHFATNNASLSNAPTLQLNQQNILSDNRQVNNSFIHF
LYRAKPNKCSLCGKRFGNSPEEKKLQSDHLDWHFRINKRMKGSSGTQTSTGSTAATAATQ
RNIQSRNWYIPDSEWVLFKDEEIVSISHDQADRRSGKQRGQSKQATRPHDNDGKFDSAKN
APEKDIVAISRGKLLAKYVVVPDSIQDMAFICPICKEKVNGVYDEDSGEWVWKNTIAIEN
KHFHATCYFETVQNRSNSGDMPTTELETLKSLIE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatacaagggcgacggtgaaggagttcgaagatgtcttaaaggagctgact
ttgaactcgcggcccatcatcacgactttgacaaagatggcagaggaaaacatctcttgt
gcccagtacttcgtccatctgttggaggcaaggatagagaagtgtgtcccaactcagaaa
ctgtacgcgttttacgcactcgattccatatgtaagaacgccgggagtccctacaccata
tatttcagtaaaaacctgtttagtatgtaccggaagacgtatctgatcgtggataacaac
accaggaccaagatgatcaatctttttaggtcctggctggagcctactaccgctactggg
gaacccgtgtttgataagggtacgcttgacaggatcgaaagctttctgatcaaggcaagc
gcactgcaccagaagaacatggaatctatgttgcctacaccgaccatctctctgctgctc
aaggaaattgacaaactcaccatgctcacagaggaaagactcagagataacaaggctgat
gcaaaacttgccacaaaactggaggtgctgaaccaactgaaggccgtccttcaaagggag
aaattgggtgtaccagctttgaaacaggtacagctgcaactgcaacaagtatttgcgcag
gaccaacagtatctgcaggataagtttgtgcaccaacagaaacagcagcttcagcaacag
cagcttcagcaacaaaaacagcaacggcaacggggggctggtatgatgggcactccggac
atactacaaggttcaaagtcgccctcgaagagtggcacacccattatacctctgttcaat
aatttcagtaaccaaccttcaaaaacagccggagctgccacgaacgcaagtgcttcgttg
tttgggagcatgtccagcatcttgtccccaaacaactttgccgagatggaaaagacaaac
agaatagccaagattaaaaacctttacgacgaactcaataaagagggactgctctacgta
cccaagagggaatctatcgttactctgtacgacagtctcaatacaaagaacaacgaaaat
aacatgcagcaaatcaagaataacttaccgccaatcccagtacttacaagcatcatattc
gattgcaaagcacatttcgccactaataacgccagtctgagcaatgcgcccacgttgcaa
ttgaaccagcaaaacattctcagcgataatcgccaggtcaataacagcttcatccacttc
ttgtatagagctaaacccaacaaatgcagtctgtgcggtaaaaggttcgggaactccccg
gaggaaaagaaattacaaagcgatcacttggactggcatttcagaatcaataaaagaatg
aagggatcttctggcacgcaaacgtctacaggctcgactgctgcgactgctgctacacag
aggaacatacagtctcggaactggtacatcccagattcggagtgggttcttttcaaggac
gaagagattgtttccatcagccatgaccaagcggatcgccgctctgggaaacagcggggc
cagtcgaaacaagcaacacgtccacatgataacgacggaaagtttgattctgcaaaaaat
gcgcctgaaaaggatatcgttgcaatcagtaggggcaagttattggcaaaatatgttgtt
gtgccggactcgattcaagatatggcattcatatgtcctatttgtaaagagaaggtcaac
ggtgtgtatgatgaggattctggggaatgggtttggaagaacaccatagcaattgaaaat
aaacatttccatgccacctgttactttgaaactgttcaaaaccgctccaacagcggggac
atgcccactacggaactggaaactttgaaaagccttattgaatag
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