Kazachstania naganishii: KNAG_0F00620
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Entry
KNAG_0F00620 CDS
T08174
Symbol
KNAG0F00620
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
kng
Kazachstania naganishii
Pathway
kng03013
Nucleocytoplasmic transport
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0F00620 (KNAG0F00620)
09122 Translation
03013 Nucleocytoplasmic transport
KNAG_0F00620 (KNAG0F00620)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0F00620 (KNAG0F00620)
03041 Spliceosome [BR:
kng03041
]
KNAG_0F00620 (KNAG0F00620)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
KNAG_0F00620 (KNAG0F00620)
Spliceosome [BR:
kng03041
]
Complex C
Other components
EJC/TREX
KNAG_0F00620 (KNAG0F00620)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
KNAG_0F00620 (KNAG0F00620)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_like
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
34526446
NCBI-ProteinID:
XP_022464977
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All DBs
Position
6:105380..106768
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AA seq
462 aa
AA seq
DB search
MTVQETSFLKRAVVTAALSNDLSASFIQDTLKKENIENVEDDRFLQVASSSKSRFGASGK
SQNQVHLLNFHSSGSYAAYTRADGSLTVWFLGSKGDFHTNETRKKLVPNAAGSDRVVTAI
SWNPNEPAQFATCSNNNEICFWDADDDVSRIKKLLVGHAKVKVNRVLFSTGGKWILCVAR
TEFLYILDSLKDYKQVCSYKLPKELDSGDGITSICWSNSNDYFFTGWRSGKIVLFQIDAL
GQVSLRLNTNGHRNSVTSLKFDPLGRYLISGSSDGTFTIWDASNMVCKRSFNDIGASVVS
IDVDHLGKIIAVCSGDDKLRFYDMNTGHLIELVNVNGLKSDIVFKFFPNKSWYIVSTGND
VLTVHQSKAPDELNYWQVARDSEYNAMHSRPERPNHATEFKSSSSRGAARARPGAPHTQG
AIGKNKPRESLARPSRFNRDEYRDSEREAGRSRPFRSGRFTR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacaagaaacctcttttctaaaaagagccgtggttacggccgctttatccaac
gatctttccgcttcttttatccaggacactttgaagaaagaaaacatcgaaaatgtcgag
gatgacagattcctccaagtagcatcttcctcaaaatccagatttggggcttctggtaaa
tcccagaaccaagtccatctactgaattttcacagttccgggagttacgcagcatatact
agagcagacggatcattgaccgtttggtttcttggaagtaaaggtgacttccacacgaat
gaaacacgaaaaaaacttgttccaaatgctgctggttcagacagggtagttaccgctata
tcgtggaaccccaatgaaccagctcagtttgctacttgctccaataacaatgaaatctgc
ttctgggacgccgatgacgatgtcagtagaataaaaaaactacttgtgggacatgccaag
gtgaaggtaaatagagtactgttcagcactggcgggaagtggatattatgtgttgcgaga
acagagtttctatacatactcgattctttaaaggattacaagcaagtgtgcagctataag
ttgcctaaggaactggactctggcgatgggataacgtccatatgctggagtaattctaat
gactactttttcactggatggagaagtggtaagattgtactcttccaaattgatgctctc
ggtcaagtaagcctaaggttaaatacaaatggtcaccgcaattcagtaacctcccttaaa
tttgatccgcttggaagatacctcatcagcggaagttcagatgggaccttcactatatgg
gatgcaagtaatatggtttgtaaacgatccttcaatgatatcggtgcctctgttgtctct
atcgacgtggatcatttggggaagattattgctgtttgttctggagatgacaaattgcgt
ttctatgatatgaatactggccatctgattgagttggtaaatgtaaatggattaaaatct
gacattgtcttcaagtttttcccaaacaaatcatggtacatcgtttcaactgggaatgat
gtattgactgtgcatcaatccaaagctccagatgagctaaactactggcaagttgcccgg
gactcggagtacaacgctatgcactctcgtcccgaaaggccaaaccacgctacagaattt
aaatcctcctcctccagaggagccgctagagcacggcctggggcgcctcacacacaggga
gcaattgggaaaaacaaacctcgagaatctctggcgagaccttctagatttaacagggat
gaatacagggattcggaaagagaagcaggtagatctcgaccttttagatcaggtagattt
acccgttga
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