Kazachstania naganishii: KNAG_0F02870
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Entry
KNAG_0F02870 CDS
T08174
Symbol
KNAG0F02870
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
kng
Kazachstania naganishii
Pathway
kng03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KNAG_0F02870 (KNAG0F02870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0F02870 (KNAG0F02870)
Enzymes [BR:
kng01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KNAG_0F02870 (KNAG0F02870)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
KNAG_0F02870 (KNAG0F02870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
34526664
NCBI-ProteinID:
XP_022465195
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All DBs
Position
6:543177..546041
Genome browser
AA seq
954 aa
AA seq
DB search
MSEKVEEGPTNFAPSPDFQWLCDELFVKFDLVATQDRRINLKPITVRYYEVVSNFVQLWR
KTVGNNFYPVLILALPYRDRRTYNIKDVTLIKAICLYLDLPKRSSTEKKLLNWKQRASRN
ERLSSFCVAEIRKRKSGPDPSKRQAITLDKLNSILDDLANGKSSRGQGSRTLADSSHFKF
CLENMSFIELKYFFDILLKVRIIGGHEHKLLNAWHPDAVDYFSVVSDLSSVTKKLYEPSV
RLRNEDLTLKIGSAFAPHLAKRLNISYEKILKKLGSDFSIEEKMDGERIQIHYMDYGNEI
KFLSRRGTDYTYLYGGDTSTGTIACYLKLNENVKECILDGEMVTYDQEKQMILPFGLVKS
SAKNFLSKESISNGSYHPLFMAFDLVYLNGTSLVDLPLYQRKDYLSKILTKCNGFVDIVS
FARCNNLESITKSLAAAISVGSEGIILKKLNSRYMVASRNDSWIKIKPQYLKQFGENMDL
IIIGRDPGKKDAFMCALGVTIDDPQPRVLQQEENVNLDLDTEDSEPETPKASRIVKFVSF
CTIANGISNAEFKEIDQKTRGLWRRFDQVKPPSEYLQFGTKKPVEWIDPKESLVLEVKSR
SLDNTESNVKKYRAGVTLFGGYCRAVRYDKDWTTCYTVSEFERDRQYKLPKVNAGESITT
SNKGRKKRNTTSILGVISPRKKRTPEGEHSDIFQNLHFCVLSDYLDPYTGNRIDRNTLTQ
LIIDYGGKVIYNVLAKEGEEGMLRIICDGFNMECNALIKRGYDILSPSWVLDCIESARLL
KLERNHCFNVSKELMELSSTRVDEYDDSFENEISTTRLDRLIDVHLHNMPSGSFSGENLD
FELRGLPPLLFFDRSVFIAETKLSDRIYAKISSETKLFGGQVTHTIEDCNLIIIPNTDDE
DKIQVLQKIRGKLASMIQKLNSTERIPPIVSEEWLYQSIKENIQVPEENYSVLS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaggttgaagagggtccaaccaactttgcaccatccccagacttccaatgg
ctgtgtgatgagctgtttgtcaaatttgatctggttgctacgcaggacagaaggataaat
ttgaagccaattactgtacgctactacgaagtcgtcagcaattttgttcagttgtggaga
aagacggttggaaacaacttctacccagttttgatattagcattgccataccgggatcgt
cgtacctacaatatcaaggatgtcacactgatcaaggctatatgtttatatttggattta
ccaaaaaggtcctccacagagaaaaagctgctaaactggaagcagagggcctctagaaat
gagcgcttatcatcattttgtgttgcagagattcggaaaaggaaaagtgggcctgatcca
agcaagagacaggcaattaccctagataaactaaattcgatactggatgacttggcaaac
gggaaaagctccaggggacaaggatcacgtactctagctgactcttcccattttaagttt
tgtttagaaaacatgtctttcattgagctcaagtacttctttgatatccttctaaaggtt
agaattattggtggtcatgaacacaagttgctgaatgcatggcatcccgacgcagttgac
tatttcagtgtggtgtctgatctcagctctgtaaccaaaaagctgtatgaaccgtcagtg
agacttaggaatgaagatctcaccctcaaaatcggcagtgcatttgctcctcacttagct
aagaggctgaacatctcctacgaaaagatactgaagaagttaggttcagatttttccata
gaggagaaaatggatggcgaaaggatacaaatacattatatggattacggcaatgagata
aaatttctgagcagaaggggcacagactacacgtatctctatggaggagatacctccaca
ggaactattgcctgttatttaaaattgaacgaaaacgtcaaagagtgtatactagatggg
gaaatggtgacctatgatcaagagaagcaaatgattctcccttttggacttgttaaaagt
agtgccaaaaattttctgtctaaagagagcatttcgaatggctcataccaccctttgttc
atggcctttgatttggtttacctaaacgggacatccttggtcgatttaccgttgtatcaa
cggaaggattacctgtccaaaatactcacaaaatgcaatggttttgttgatatagtatcg
tttgcaagatgcaacaacctcgagagcataaccaaatccctagctgctgccatttctgtg
gggtcggaagggattattctgaaaaagctcaactccaggtatatggtagctagtcgaaat
gacagctggatcaagatcaaaccgcaatatcttaaacaattcggagaaaatatggatttg
ataataatcgggagagatcccggtaagaaggatgcattcatgtgcgcgctaggagtcact
atagacgatccgcagccgagggtattacaacaagaagagaatgtcaatctagatttagac
actgaagactcggaacccgaaacccccaaagcatcccggattgtgaaatttgtgtcattt
tgcactatcgctaacggtatatcaaatgccgagtttaaagaaatcgaccaaaaaacacga
ggtttatggcgaaggtttgatcaagtaaaacctccttcagaatatcttcagtttggaacc
aaaaaaccagtcgagtggatagaccccaaagagtcattagtattggaagtcaaatcaaga
tctttggataataccgaatctaacgtaaaaaaatacagagccggagtaacgctgtttggg
ggctactgtagagcagtacgttacgacaaggactggaccacatgttatacagtttctgaa
tttgaaagagatcggcagtacaaactaccgaaagtaaatgcaggcgaaagcatcaccacc
tcgaacaaaggcagaaagaaaagaaacacaacttctattcttggagtaatttcaccgaga
aaaaagagaacaccggagggtgaacattcagatatatttcaaaacctccacttttgcgtt
ctatcggattatctggatccgtataccggtaaccgaatagacagaaacacacttacacaa
cttataattgattatggtggaaaggtgatatataatgtcttggcgaaggagggcgaagag
gggatgttgcggattatatgtgatggtttcaatatggaatgtaacgctttgatcaagaga
ggatatgatatattaagccccagttgggtgctggactgcattgaaagtgcaagactactc
aaactagagcgaaaccattgcttcaacgtttccaaagaactaatggaactaagttccact
cgggttgatgaatatgatgatagtttcgagaacgaaattagcaccactaggctagacagg
ttgatagatgttcatctccataatatgccgtcagggtccttttccggcgaaaacttggat
ttcgaattgagaggactaccacctcttttattttttgatcgctcggtatttattgctgag
acgaagctgtcggacagaatatacgctaagatatcatcagagactaaattgtttggagga
caagtgacccacactatagaggattgtaacttaataatcatacccaacactgatgacgag
gacaaaatacaagtattgcagaaaattcgtggcaaactggccagtatgatacagaagttg
aattcaacagagcgtattccccccattgtgtctgaggaatggctctatcagtcgataaaa
gaaaatattcaagtcccagaggaaaattattcggtgctctcttaa
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