Kazachstania naganishii: KNAG_0L01770
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Entry
KNAG_0L01770 CDS
T08174
Symbol
KNAG0L01770
Name
(RefSeq) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
kng
Kazachstania naganishii
Pathway
kng03008
Ribosome biogenesis in eukaryotes
kng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KNAG_0L01770 (KNAG0L01770)
09123 Folding, sorting and degradation
03018 RNA degradation
KNAG_0L01770 (KNAG0L01770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kng03021
]
KNAG_0L01770 (KNAG0L01770)
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0L01770 (KNAG0L01770)
03009 Ribosome biogenesis [BR:
kng03009
]
KNAG_0L01770 (KNAG0L01770)
03016 Transfer RNA biogenesis [BR:
kng03016
]
KNAG_0L01770 (KNAG0L01770)
Transcription machinery [BR:
kng03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KNAG_0L01770 (KNAG0L01770)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
KNAG_0L01770 (KNAG0L01770)
Ribosome biogenesis [BR:
kng03009
]
Eukaryotic type
Pre-60S particles
RNases
KNAG_0L01770 (KNAG0L01770)
Transfer RNA biogenesis [BR:
kng03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
KNAG_0L01770 (KNAG0L01770)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
34528569
NCBI-ProteinID:
XP_022467040
LinkDB
All DBs
Position
12:complement(319070..322081)
Genome browser
AA seq
1003 aa
AA seq
DB search
MGVPSFFRWLSRKYPKIISPVLEERPQIVDGVELPIDYSTENANGELDNLYLDMNGIVHP
CSHPENKPPPETEDEMLLAVFEYTHRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRLGL
AKDAELQNEKKEEELRKREHYGEVIDDSVKAKKTWDSNAITPGTPFMDKLALALRYWTAF
KLATDPGWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHCIYGLDADLIFLG
LATHEPHFKILREDVFAQEYKSSKRDIDANNMTEEERQILLKRDAEKPFLWLHIGILREY
LAAELFVPRLPFAFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIWKKVLP
SMKTYMTCDGQLNLASVEVVLRQLGAREPDIFQTKYIQTQRNEARYRQNNKRNGKNVSKG
QDRHPTKVNEQLQMYDTSGNLAKGAWNLTTSDMVRLKKEVMLANEGDDRALAVVREQSEK
NNKMMQEITEEDMDKVVDFANKNNFSVAETLKKKLAAKKHQLEEKEAEEDEKEAKVVKKF
KSEDDDLKAKIKAEVEDEVDNEERGPLVSTPEQPTSIISSSELTGGVIDTDDTVRLHESG
YKERYYTGKFNISKDQIEPLRKDMVKSYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAAD
FFDINDIKVEFKQGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSDVDSPIIDFYPQEFKI
DMNGKKMSWQGIALLPFIDEKRLLETVRAQYPKLSEEERARNCRNEDILLISNKNANYEK
FVKKLYKDSKEHTDVLFRHFKTGLSGIVATDVEGFTLNGKLPCPVHGGSLPELSTNLFLK
MLYKMLPLPGKNKSLLLNGYIPSKPVLTPYDLESVFVNKSGYGRNRRGFGGSPQYTEIPT
GPYGTTQYSPRVGGYRSFFYFASNSNNNNNANKMGNRYNGNNNYNQQQNGPPHVNSNNDY
RNNRSGGYNPERNNNYRGNNYRQGNNRNFNNGNASRYQGSNRR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttccgtcgtttttcagatggttgtcacggaagtacccaaagatcatctccccc
gtgctggaggagaggccacagatcgtcgatggggtcgagttgcccatcgattactcgact
gagaatgccaatggggaactcgacaatctgtatctcgatatgaacggtatcgtgcatcct
tgttcgcacccagagaacaaaccgcctcctgaaacggaggacgagatgctgctcgccgtg
ttcgagtacacgcacagagtgctcaatatggctaggcccaggaaggttctcgtgatggcc
gtggacggtgtggcgccaagagcgaagatgaaccagcagcgtgcgagaagattaggtctg
gcgaaggacgcggagttgcagaacgagaagaaagaggaggagttgcggaaaagagagcat
tacggtgaagtcatcgacgattccgtgaaggccaaaaaaacttgggactcgaacgcaatt
acaccgggtacgcccttcatggataagctagcactggcgcttcgatattggaccgcgttc
aagctggccactgaccctggatggaagaacttgcaagttgttattagtgatgcaacagtt
ccaggtgaaggtgaacacaaaattatgaactttattaggtcacagagagcggacccagaa
tataatccaaatacctcccattgtatctacgggttggatgcggatttgattttcttgggt
cttgctacccacgaaccacatttcaaaattttgagagaggatgtctttgcccaagagtat
aagtcttctaaaagagatatagacgcgaataatatgactgaggaggagcgacagattctt
ttgaagcgggacgctgagaagccgtttctatggttgcatattggcatcttaagggaatat
ctcgcagcagaactgttcgtccccagattaccctttgcgtttgacctggagcgcgccatc
gacgattgggtattcatgtgtttcttctgtggtaatgatttcttaccccatttgccctgt
ctcgatgtgagagagaacagtattgatatcttgttggacatttggaaaaaagtgcttcct
agcatgaagacgtatatgacatgtgatggtcagttgaatttagcttcagtggaagttgta
cttagacagttgggtgccagagaacctgatattttccaaaccaaatacatccaaacgcaa
agaaacgaagctcgatataggcaaaataacaaacgtaacgggaagaacgtttccaagggg
caagataggcaccctacaaaggtcaatgaacagcttcaaatgtacgacacctcaggaaat
ctcgcaaagggtgcatggaacttgacaacaagcgacatggttcggttgaaaaaggaagtc
atgctggccaatgaaggtgacgatcgcgccttagcagttgtgagggaacagagcgagaaa
aataataagatgatgcaagaaatcaccgaggaggatatggacaaagtagtcgattttgct
aacaagaataatttctccgttgctgaaactcttaagaaaaagttggccgcaaagaagcat
caattggaagagaaggaagcagaggaggatgaaaaggaggcaaaggttgtgaaaaagttc
aagagcgaggacgatgatttgaaggccaaaattaaggcagaggtggaggatgaagttgat
aatgaggagaggggccccctagtctccactcctgaacaaccaacatccatcatatctagt
tcagaactaacgggtggtgtgatagatacggatgacactgtgaggttacacgaatccggg
tacaaggagagatattacactggtaagttcaatatttcgaaggatcagatcgagccgcta
cggaaagatatggttaaatcctacattgaaggtgtttcatgggtactgttgtattattat
caaggttgtccatcctggaattggtattatccataccattatgccccttttgcagcagac
ttctttgatatcaacgatataaaagtcgaattcaagcaaggagaacctttcctaccatac
gaacaacttatgtccgtgttaccagctgcttctggccatactttaccacctatcttccgg
ccactgatgagcgacgtagactcaccaattattgatttctacccacaagagtttaagatt
gatatgaacggtaaaaaaatgtcgtggcaaggtattgcacttttaccgtttattgacgag
aaaagactgttagaaacagttcgtgctcaatatccaaaattgagcgaagaagaaagagca
cggaactgtcgtaatgaagatattttactgatcagtaataagaatgctaactacgaaaag
ttcgttaagaaactgtacaaagattctaaagaacacactgatgtgttattcaggcacttc
aaaacaggtttgagcggtatagtcgccacagatgtcgagggtttcactcttaatggcaaa
ttgccatgccccgtccatggtggttcattgcctgaactgtctacaaatttgtttttgaag
atgctctataaaatgcttcctttgcctggtaagaataagtctcttttattgaacggctac
attccatctaaaccagtattaacaccatacgatcttgagtccgtttttgtgaataagagt
ggatatggcagaaacagaagagggtttggtggtagtccacagtacactgagattccaact
ggtccatacggtacaactcagtatagccctagagttggtgggtataggtcttttttctat
tttgcaagcaattccaataataacaacaatgctaataaaatgggcaataggtataacggc
aacaacaattacaaccaacagcaaaatggcccaccgcatgtcaactcaaataatgactac
agaaacaacaggagtggcggttacaatcccgaaagaaataacaactatcgtggtaataac
tatcgccagggcaataacaggaattttaacaacgggaatgccagtcgttaccagggtagc
aatcggcgttga
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