Kosakonia sp. SMBL-WEM22: HF650_15920
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Entry
HF650_15920 CDS
T08549
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_15920
DNA repair and recombination proteins [BR:
kob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HF650_15920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
AAA_22
SLFN-g3_helicase
zinc_ribbon_2
zf-tcix
UPF0547
Motif
Other DBs
NCBI-ProteinID:
QNQ22800
UniProt:
A0A7H0MKI9
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Position
3307692..3309452
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AA seq
586 aa
AA seq
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MTFTLRPYQREAVDATLAHFRQHAEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYIALGLEADIFAAGLKRKQSHGKVVFGSVQSVARNLNQFQGEFSLLVVDECH
RISDDDDSQYQQILSHLKAVNPRIRLLGLTATPFRLGKGWIYRFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQTQSNGLFSEAELNRELKKQKRITPH
IVSQIIEFAQTRKGAMIFAATVEHAREITGLLPANDAALITGETPGPQRDALIEAFKQQQ
FRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEIGAPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDYRFRFKNCPHCNAENDIAARRCRSCDAILVDPDDMLKAALKLKDALVLRCSGMT
LQHGADEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFMRPHTRTPGVPLRWIVA
ADIVAQQALLRHPDFVVARLKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacgctacgcccctatcaacgcgaagcggtggatgccaccctcgcccatttt
cgtcaacacgctgaacctgcggtaattgtgctgccaaccggtgccggcaaaagcctggtg
attgccgagctggcgcggctggcgcgcggtcgcgtgctggtgctggcgcatgtgaaagag
ctggttgcgcagaaccacgccaaatatattgctctgggactggaagccgatattttcgcc
gccgggctgaagcgcaagcagagccacggcaaagtggtcttcggcagcgtgcagtcggta
gcgcgcaacctgaatcagttccagggtgagttctccctgctggtggtggatgagtgccat
cgcatcagcgatgatgacgacagccagtatcagcaaattctttcccatctgaaggcggtg
aatccgcgcattcgcctgctcggcctgacggcgacgcccttccgtcttggcaaaggatgg
atttaccgctttcactatcacggcatggtgcgcggggatgaaaaagcgctgtttcgcgac
tgtatttatgaactgccgctgcgctatatgatcaaacacggttatctgacgccgccggag
cggctggatatgccggtggtgcagtatgatttcagccgcttacagacgcagagcaacgga
ctgttcagcgaagcggagctgaaccgcgagttgaagaaacagaagcgcattacgccacac
attgttagccagattattgagtttgcgcagacgcgcaaaggggcgatgatctttgccgcc
acggtggagcacgcccgcgagatcaccggactgctgcccgctaacgacgccgcactgatc
accggtgaaacgcccggcccgcagcgcgacgccttaattgaagcctttaaacagcagcag
ttccgctttctggttaacgttgcggtgctgaccaccggctttgatgcaccacatgtcgat
ctgattgccattttgcgcccgacagagtctgtcagcctctatcagcagattgtgggtcgc
ggcctgcgcctggcgccagggaaaaccgactgcctgatcctcgattacgccggtaacccg
cacgatctctacgctccggagattggcgcgccaaaaggtaaaagcgataacgtgccggtg
caggtcttctgcccaggctgcggctttgctaacaccttctggggcaaaaccaccgctgac
ggcacgctgattgagcactttggccgccgctgccagggttggtttgaagatgatgaaggg
caccgcgagcagtgcgattaccgtttccgcttcaaaaactgcccgcactgcaacgcggag
aatgatatcgccgcccgccgctgccgcagctgtgatgccatcctcgtcgacccggacgat
atgctgaaagccgcgctgaagctgaaagatgcgctggtgctgcgctgcagcggcatgacg
ctccagcacggcgcggatgagaaaggcgaatggctgaaaatcacctactacgatgaagat
ggcgcggatgtcagcgagcgctttcgtctacagactccggcgcagcgcaccgcctttgag
cagctctttatgcgcccgcatacgcgtacgcccggcgtgccattacgctggattgtggcg
gcggatatcgtcgcccagcaggcactgttgcgtcaccccgattttgtcgtcgcgcggctc
aagggtcagtactggcaggtgcgggaaaaagtgtttgattacgaaggtcgttttcgccgg
gcgcatgaattgcgcggttaa
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