Klebsiella michiganensis M1: HR38_11200
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Entry
HR38_11200 CDS
T03349
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kom
Klebsiella michiganensis M1
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kom03400
]
HR38_11200
DNA repair and recombination proteins [BR:
kom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HR38_11200
Archaeal homologous recombinant proteins
HR38_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
T2SSE
nSTAND3
ABC_tran
AAA_21
cobW
AAA_15
NTPase_1
TsaE
AAA_22
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AIE68989
LinkDB
All DBs
Position
complement(2361312..2364446)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSSVSQSQNDLMTRDTAECLAEVEFEVKGIAYRAFWSQNRARNQPDGNLQVPRVELARCE
DGKILADKVKDKLELTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAQVFEKHKQARVELEKIQAQASGVLLLSDEQQQALQQSLQALTDEEKQQVSEQT
RLQNARQWLVRGAELTAEDRQAQTALREAQAALEQAQPQLTVLLNAQPAEQLRPQWARQQ
EQTAALAQTRNLREEVNTRLHERLRLRAGIRLAARQQSERLQNHQQTLAAWLKEHDRYQR
WGNALAGWRAAFQQQARDTQQQAALQQRLAETSRRLCELPPDGLALDAEQVSAGLAQHAA
ARALRQQLAALHGQLQPLSQRLSQLHAAGQASKQEQERLETTLAQRRQAYKEKNQQFSDV
KALCEMEARIAGLEAERARLQPGSPCPLCGSAQHPAVAEYQALVPGVNQARRDALEREVK
QLAEAGALVRGELDALLKQQQKEATEKASLLQQEQALTSRWQATIAGLNIDLTPKDDIPG
WLNAQQEHEQRLYQHQQRLAWQAQQQECQQQLQQLQQEQAQRSAALAAELAAFALSLPAA
EQAAGWLAQREDETRGWQAKQNELIALQEQLQQLTPLLESLPETDLAAEPAPLDGWRQVH
DDCLALQSQWQTLGQQESQQQAQLKESEAQFSAALAASPFADQQAFLAALLDEEARRRLE
RLKQTLESTLQQNQALAMRAREALDSHRQQPPAETDISQPLERVQEQLQQLTTLLRENSA
RQGEIRQQLKQNAENQQRQQSLRQQMERAAQEVEDWGWLNALIGSREGDKFRKFAQGLTL
DNLVWLANHQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALA
LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKERI
PVQIKVKKINGLGYSRLDKAFAVE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatactcagcttacgcctgaaaaacctcaattcactcaaaggcgaatggaaaatt
gatttcaccgctgagcccttcgccagcaacggactgttcgcgattaccgggccaaccggc
gccggaaaaaccaccctgctggatgctatctgtctggcgctgtatcacgaaaccccgcgc
ctgagcagcgtgtcgcaatcgcagaacgatctgatgacccgcgacaccgccgaatgcctg
gcggaagtggagtttgaggtaaaaggcatcgcctaccgcgccttctggagccagaaccgg
gcgcgaaaccagccggacggcaacctgcaggttccgcgcgtcgagctggcgcgctgcgag
gacggcaagatcctcgccgataaggtcaaagataagctggaactgaccgcctcgctcacc
ggcctggactatggccgcttcacccgctcgatgctgctgtcgcaggggcagttcgccgcc
ttcctgaacgcgaaaccgaaagagcgcgccgagctgctggaggagctgaccggcaccgag
atttacggccagatttcggcacaggtctttgaaaagcataagcaggcccgcgtcgagctg
gagaaaattcaggcccaggcctccggcgtgctgctgctgagcgacgaacagcagcaggcg
ctccaacaaagtttgcaagcgcttactgatgaagaaaaacagcaggttagcgaacaaacc
cgcttgcaaaatgcccgtcagtggctggtacgcggcgcagagctgacggcagaagatcgg
caggctcaaaccgcgctacgcgaagcgcaggctgcgctggagcaggcgcaaccgcagctt
accgtattgctgaatgcccagcccgcggagcagctacgcccgcagtgggcgcgtcaacag
gagcaaaccgccgcgctggcgcaaacccgcaatctgagagaagaagtaaatactcgctta
catgaacgactgcggctgcgagcggggattcgcctcgccgcccggcagcaatctgaacgc
ctgcagaaccaccagcaaacgctcgccgcatggctaaaagagcacgaccgctaccagcga
tggggcaatgcgctggcgggctggcgggcagctttccagcagcaggcccgcgatacgcag
cagcaagccgcgctgcagcagcgtctggcggaaaccagccgtcggctgtgcgaactgccg
cccgacgggctggcgctggatgctgagcaggtcagcgccggcctcgcgcagcacgccgcg
gcgcgcgctctgcgccagcagctcgcggccctgcatggccagctgcagccgctgagccag
cgtttatcccagcttcatgccgccgggcaggccagtaagcaggagcaggagcggctggaa
accaccctggcccagcgccgtcaggcctataaagagaagaatcagcagtttagcgatgtc
aaagccctgtgcgaaatggaagcgcgcattgccggcctggaggccgagcgagcccgcctg
cagcccggttccccctgtccgctctgcggttccgcgcagcatccggccgtcgccgagtat
caggcgctggttcccggcgtaaatcaggcgcggcgcgatgcgcttgagcgcgaagtcaaa
cagctggcggaggccggcgccctggtgcgcggcgagctggacgccctgcttaagcagcag
caaaaagaggccaccgagaaagcatcgcttctgcagcaggagcaagcgcttacctcacgc
tggcaggcgacgatcgccggattaaatatcgacctgacgccaaaggatgacattcccggc
tggctaaacgcgcagcaggagcatgaacagcggctgtatcagcatcagcagcgtctggcc
tggcaggcccagcagcaggagtgccagcagcagctccagcagctccagcaggaacaagcg
cagcgcagcgccgcgctggcggctgaactggccgcatttgcgctgagtttaccggcagcg
gagcaggccgcaggctggctggcgcagcgggaagacgagacccgcggctggcaggccaaa
cagaacgaactgatcgccctgcaggaacagcttcagcagctgaccccgctactggagtcc
ttgccggaaacggacttagcggcggaacccgcgccgctggacggctggcgccaggtgcac
gacgactgcctcgcgcttcagagccagtggcaaaccctggggcagcaggagagccagcag
caggctcagttgaaagagagcgaagcgcagttcagcgcggcgctggccgccagcccgttc
gctgaccagcaggcgtttctcgccgcgctgctcgatgaggaggcgcgccggcgccttgaa
cgcctgaagcagacgctggaaagtacgctacagcagaatcaggcgctggcgatgcgggcc
cgcgaggcgctggacagccaccgccagcagccgccggcggaaacggatatcagccagcct
cttgagcgggtacaggaacagcttcagcagctgacgacgctgctgcgggaaaacagcgcc
cgtcagggagagattcgccagcagctgaagcagaatgcagaaaaccagcagcgtcagcag
tcgttacgccagcagatggaacgcgctgcgcaggaagtggaagactggggatggctgaac
gcgcttatcggctccagagagggcgataaattccgtaagtttgcgcaaggactgacgctg
gataacctggtgtggctggccaaccatcagctcaaccgcctgcacggccgctatctgctg
caacgcaaagccagcgacgccctggagctggaagtggtcgatacctggcaggcggacgcg
gtgcgcgacacccggacgctgtccggcggcgagagcttcctcgtgagcctcgcgctggcg
ctggcgctctccgatctggtgagccataaaacgcggatagactcgctgtttctcgatgag
ggcttcggcactctggacagcgaaaccctggataccgcgctggatgcgctggacgcgctc
aacgccagcggcaagattatcggcgtcatcagccacgttgaggcgatgaaagagcgcatt
cctgtgcaaattaaagttaaaaaaatcaacgggctgggctatagccgtctcgataaagct
ttcgccgtcgaataa
DBGET
integrated database retrieval system
