Kosakonia oryzendophytica: O9K67_08055
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Entry
O9K67_08055 CDS
T08786
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_08055
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
O9K67_08055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
AAA_22
SLFN-g3_helicase
zf-tcix
UPF0547
zinc_ribbon_2
DZR
TniB
Motif
Other DBs
NCBI-ProteinID:
WBT60570
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All DBs
Position
complement(1661008..1662768)
Genome browser
AA seq
586 aa
AA seq
DB search
MTFTLRPYQREAVDATLAHFRQHAEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYVALGLEADIFAAGLKRKQSNGKVVFGSVQSVARNLSQFQGEFSLLVVDECH
RISDDDDSQYQQILAHLREVNPHLRLLGLTATPFRLGKGWIYRFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IVSQIVEFAQTRKGVMIFAATVEHAKEITGLLPADDAALITGDTAGPERDALIAAFKQQQ
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEIGAPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWLEDDEG
HREQCDYRFRFKNCPQCNAENDIAARRCRSCDCVLVDPDDMLKAALKLKDALVLRCSGMT
LQQGADAKGEWLKITYYDEDGADVSERFRLQTAAQRTAFEQLFIRPHTRTPGVPLRWIVA
TDIIAQQARLRHPDFVVARLKGQFWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacgctgcgcccttaccaacgcgaagcggtggacgccaccctcgcccatttt
cgtcaacatgcagaacctgcggttattgtactgccgaccggtgccgggaaaagcctggtg
atagccgaactggcacgtctggcacgcggtcgcgtgctggtgctggcgcatgtcaaagag
ctggtagcacaaaaccacgccaagtatgttgcgcttgggctggaagcggatatcttcgct
gccgggttaaagcgtaaacagagcaacggcaaagtggtgtttggcagcgtgcaatccgtg
gcacgtaacctgtcgcagtttcagggcgagttttcactgttggtggtagatgagtgccac
cgtatcagtgatgatgacgacagccagtatcagcaaatcctggcgcatctgcgtgaggtc
aacccccacttacgtctgctcggtttgacggcaacccccttccgtctcggcaaaggctgg
atttaccgttttcattatcatgggatggtgcgcggtgacgaaaaggcgttgttccgcgac
tgcatttatgagcttccgctgcgctatatgattaaacatggctatcttaccccgccggag
cggctggatatgcctgtggtgcagtatgatttcagccgcctgcaggcacagagcaacggt
ctgttcagtgaagctgatctgaaccgcgagctgaaaaaacagcaacgcattacaccgcat
attgtcagccaaatcgttgagtttgcgcagacgcgcaaaggggtgatgatctttgccgcc
accgttgaacatgccaaagagattaccggcctgctgcccgccgatgacgccgcgcttatc
accggtgatacagctggcccggaacgcgatgcgttgatcgcggcatttaaacaacaacag
tttcgttatctggtgaacgtgtccgtgttgaccaccggctttgatgcgccgcatgtcgac
ctgattgctattttacgtccgacggagtctgtcagcctgtatcagcaaatcgtcggacgt
ggtctgcggctggcgcccggaaaaaccgactgcctgatcctggattacgcgggcaaccct
cacgatctctacgcaccggaaattggtgcaccaaaaggcaaaagtgacaatgttccggtg
caggtgttctgccccggttgcggttttgccaacaccttctgggggaaaaccactgccgat
ggcacgctgatcgaacattttggccgccgttgccagggctggctggaagatgatgaaggc
catcgggagcagtgtgattatcgctttcgctttaaaaactgcccgcaatgcaatgcggaa
aatgacattgccgcccgccgctgccgaagttgcgactgcgtgctggttgaccccgacgat
atgctgaaagcggcgctgaagctcaaagatgcgctggtactgcgctgtagtggtatgaca
ttacaacaaggggcggatgcgaaaggcgaatggttgaaaatcacctactacgacgaagac
ggcgcggatgtcagtgagcgcttccgtctgcaaaccgccgctcagcgcaccgctttcgaa
caactgttcattcgcccgcatacccgcacgcctggcgtgcccctgcgctggattgtcgcc
acggatatcatcgcgcaacaggcacggctacgacaccctgattttgtggtagcgcgcctc
aaggggcagttctggcaagtgcgggaaaaagtcttcgattatgaaggtcgctttcgtcgg
gcgcatgaattacgcggataa
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