Kosakonia oryzendophytica: O9K67_23960
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Entry
O9K67_23960 CDS
T08786
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O9K67_23960 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_23960 (priA)
Enzymes [BR:
koo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O9K67_23960 (priA)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O9K67_23960 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
PriA-like_WH
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_19
zinc-ribbons_6
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WBT58107
LinkDB
All DBs
Position
4981609..4983801
Genome browser
AA seq
730 aa
AA seq
DB search
MPVAHVALSVPLPRTFDYLLPDDMPVSAGCRVRVPFGTQHRVGIVVAISDKSELPLTELK
RVEEVLDSDPSFSPPVWRLLLWAADYYHHPIGDVLFNALPVLLRQTKPASAEFQGYWFAT
EQGQATDINRVKSAKQQQALSALRKGKIWQHQLAALDLKSVTLQALRAKGLAEMNSEAPS
FSDWRNSFSVSGDRLRLNTEQATAVGAIHSAADRFSAWLLAGVTGSGKTEVYLSVLENVL
SQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLVTWQKAKSGEAAIVIG
TRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE
TLYNVRMRKYHLLRLTRRAGNARPATQHVLDMKGQQLQAGLAPALINRIRQHLQAGNQVI
LFLNRRGFSPALLCHDCGWIAECPRCDHYYTFHQAQQHLRCHHCDSQRPVPRQCPSCGST
HLLPVGLGTEQLEQALAPLFPGVPVSRIDRDTTSRKGALEQHLAEVHRGGARILIGTQML
AKGHHFPDVTLVALLDVDGALFSADFRAAERFAQLYTQVSGRAGRAGKQGEVVLQTHHPE
HPLLLTLLHKGYDTFAEQALAERQTLQLPPWTSHVLIRAEDQNNQHAPLFLQQLRNLLQA
SPLADNPLWILGPVPALAAKRAGRYRWQILLQHPSRVRLQHIVNGALALVNTLPEARRVK
WVLDVDPIEG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgctcacgttgcgctgtctgtacctttgccccgcacctttgactacctgctg
ccggatgacatgcccgttagcgcaggttgtcgcgtgcgtgtgccttttggtacgcagcac
cgcgttggcattgtggtggccatcagcgacaaaagcgaattgccgctcacagagttaaaa
cgtgttgaagaggtactcgacagcgacccgtcattttctccaccggtatggcgactgctg
ttgtgggcagcggattattatcatcatcctatcggcgatgtgctgtttaatgccctcccc
gttctgctacggcaaacaaagccagccagcgcggagtttcaaggatactggttcgccacc
gagcagggacaagcgacggacatcaatcgcgtaaagtcggcaaagcaacagcaggcgtta
tcggcgctgcgtaaaggaaaaatctggcagcatcaactggccgcgttggatcttaaaagc
gtcactttacaggcattgcgcgcgaaaggtctggcggagatgaacagtgaagctccctct
tttagcgactggcgcaacagcttctcagtaagcggcgaccggctgcggttaaacactgag
caggcaacagcggtgggggccattcatagcgcggcggatcgtttctccgcttggctgctg
gcgggcgttactggatccggcaaaacagaagtctatttaagcgtgctggaaaacgtactg
tcgcaaggtaaacaggcgctggtgatggtgccggaaatcggtctgacaccgcaaactatc
gcccgttttcgtgaacgttttaacgcgcccgttgaggttctgcattccgggctgaacgac
agcgaaaggttggtgacatggcagaaagcgaaaagcggcgaagccgccatcgttatcggt
acccgttcgtcgttgtttacgccgtttaaaaacctcggtgtgatcgttatcgacgaagag
cacgacagttcttataaacagcaagaaggctggcgctaccacgcccgcgatctcgcggtt
taccgcgcccacagcgagcaaatcccgattattcttggttccgccaccccggcgctggaa
accctgtataacgtccggatgcgtaaatatcatctgttgcgactcacccgccgcgccggt
aatgcgcgcccggcaacacagcatgtactggatatgaaaggccagcagttacaggccgga
ctggcacctgcgcttatcaaccgcatacgccagcatctgcaggcgggcaatcaggtgatc
ctgtttcttaatcgtcgcggtttttccccggcgctgctgtgccatgattgcggctggata
gcagaatgcccccgctgcgatcactattacaccttccaccaggcgcagcagcatttacgc
tgtcaccactgcgatagccagcggcctgtgccgcgccagtgtccttcctgcggctccacg
cacttactgcctgtggggttaggcacagaacaactggaacaagcgctggcccccctgttt
ccgggtgtgccggtatcgcgtatcgaccgggataccaccagccgtaaaggggcattagag
caacatcttgccgaagtccaccgtggcggcgcacgtattcttattggcactcagatgctg
gcgaagggtcaccactttccggatgtcacgctggtcgcactgctggatgtggatggcgca
ttgttttcggcggatttccgcgcagccgaacgtttcgcccagctttatacccaggtatcc
ggtcgcgctggccgtgccggaaagcagggtgaggtggtgttgcaaacacaccatccggaa
catccgctcttgctgacactgctgcataaaggctatgacacctttgctgaacaggcgctg
gcagagcggcaaaccctgcaattacccccgtggaccagtcatgtgctgatccgcgccgaa
gatcaaaacaaccagcacgcgcccctgtttttacaacagttgagaaatctgctgcaggcc
agcccgctggcggataatccattgtggatccttggaccggttcccgcgctggcggctaaa
cgtgccggacgataccgctggcagatcctgttacaacacccttcccgcgttcgtctacaa
catattgttaacggcgcactggcgctcgtgaatactctgccggaagcgcgccgggtgaaa
tgggtgctggatgtcgaccctatcgaaggctaa
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