Kosakonia oryzae: AWR26_04495
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Entry
AWR26_04495 CDS
T04433
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
kor
Kosakonia oryzae
Pathway
kor00040
Pentose and glucuronate interconversions
kor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AWR26_04495
Enzymes [BR:
kor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
AWR26_04495
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
DUF5111
DUF5074
Motif
Other DBs
NCBI-ProteinID:
ANI81444
LinkDB
All DBs
Position
complement(932870..934000)
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AA seq
376 aa
AA seq
DB search
MAKGKIVQLTFRHQHDEKTGHEVIRLTPPHIICHRNYFYQKCFTRDGGKLLFGGAFEGHW
NYYLLDLARQEATQLTEGAGDNTFGGFLSADDRSLWYVKNTRELRRVDLQTLEEHIVYQV
DDDWVAYGTWVANSACTKLVGIEIKKSDWQPLTNWQKFRDFYFTQPECRLIRIDLHSGER
DTLVQEKRWLGHPIYRPFDDSTVAFCHEGPRDVIDARMWLINEDGSNLRKVRQHQPGESF
THEFWVPDGSALYYVAHQENDPQRYLFSADPQTLENRQLMAIPPCSHLMSNEDGSLVVGD
GAPHHTGDIHLNDPFIWVFNIISGEQTAICQHNSSWKVLDGDRQVTHPHPSFTPDNQWVL
YTSDAEGMPALYLARV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggggaaaattgttcaactcactttccgtcaccagcacgatgaaaaaacgggg
cacgaagttatccgtctgacgccgccgcacattatttgtcaccgtaattacttctaccaa
aaatgttttacccgcgacggcgggaaactccttttcggcggcgcgtttgaaggccactgg
aattactatttactggatctcgcccgtcaagaagcaacacagttaaccgaaggcgccggg
gataatactttcggcggctttttatcggcggatgatcgttcgctgtggtatgtgaaaaac
acccgcgaattgcggcgcgttgatctgcagacgctggaagagcatatcgtttatcaggtc
gatgatgactgggtggcttacggcacctgggtggcgaattccgcctgcacaaaactggtg
ggtatcgaaatcaagaaaagcgactggcaaccgctgaccaactggcaaaaattccgcgac
ttctactttacgcagccggaatgccgattgatccgcatcgatttacacagcggcgaacgc
gacacgttggtgcaggaaaaacgctggctggggcacccgatttaccgtccgtttgatgat
tccaccgtggcattttgtcatgaagggccgcgcgatgtgattgatgcgcgtatgtggctg
attaatgaagatggcagcaacctgcgcaaagtccgccagcaccagccgggagagagcttt
acccatgaattttgggtaccggacggctccgcgctctattacgtggcgcatcaggagaac
gatccgcagcgctacctgttcagcgccgatccacagacgctggaaaaccgccagttaatg
gcgatcccgccctgctcgcatttgatgagtaacgaggatggcagcttagtggtgggcgat
ggcgcgccgcaccataccggcgatattcatcttaacgatccgtttatctgggttttcaat
atcatcagcggcgagcagaccgcgatttgccagcataacagtagctggaaagtactggac
ggcgaccgccaggtgacgcatccgcatccgtcgtttacgccggataatcaatgggtgctc
tacacctcggatgccgaaggaatgcccgcgctctatctggcgcgggtgtaa
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