Kosakonia oryzae: AWR26_17305
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Entry
AWR26_17305 CDS
T04433
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kor
Kosakonia oryzae
Pathway
kor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWR26_17305 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kor03400
]
AWR26_17305 (uvrB)
DNA repair and recombination proteins [BR:
kor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWR26_17305 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWR26_17305 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
IF2_N
AAA_30
UB2H
Helicase_C_2
AAA_22
DUF1844
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
ANI83830
LinkDB
All DBs
Position
complement(3705283..3707304)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTNGMIIDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGHVESTVQR
FTIYPKTHYVTPRERIVQAMEEIKDELAERRKTLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQSIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQHAYNVKHGITPQGLNKKVVDILAMG
EGLAKTRAKGRGKTRTPAQVEAAELALTPKALQQKIHELEGLMMQHAQNLEFEEAAQVRD
QLHQLRELFIVAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattctgcttttcgcccctccggcgaccagcctgaggcg
attcgtcggcttaaggaaggtctggaagacggcctcgcgcaccagacgctgctgggggtt
accggctcgggtaagacgtttaccattgccaatgttattgccgatctgcaacgcccgacg
atggtgctggcgccgaacaaaacgctggcggcgcagctgtatggcgaaatgaaggagttc
ttcccggaaaacgcggtggagtatttcgtctcctactatgactactaccagccggaagcc
tatgtgcccagttcggacacctttatcgaaaaagatgcctcggtgaacgagcatatcgag
cagatgcgtctttcagcgacgaaggcgctgctggaacgccgtgatgtggtggttgtggcg
tccgtttcggccatctatggtctgggcgatccggatctctacctgaaaatgatgctccat
ctgaccaacggcatgattatcgaccagcgttcgattctgcgtcgtctggcagagcttcag
tacacccgcaacgatcaggctttccagcgcgggacgtttcgcgtgcgtggggaggtgatt
gatatcttcccggcggaatcggatgacctggcgctgcgcgtggagttgttcgatgaagaa
gtagaacgtttgtcgctgtttgacccgctcaccggacatgtggaatcgacggttcagcgc
tttaccatctacccgaaaacgcactacgtgacgccgcgcgaacgtatcgtgcaggcgatg
gaagagatcaaagatgagctggcagaacggcgcaaaacgctgctggcgaacaataagctg
ctggaagagcagcgtctcagccagcgcacgcagttcgatctggagatgatgaacgagctg
ggctactgctccggcattgaaaactactcgcgctatctctccggacgcggccctggcgaa
ccgccgccgacgctgttcgattacctgccagccgatggcctgttagtgatcgacgaatcc
cacgtcaccatcccgcaaatcggcgggatgttccgtggcgaccgggcgcgtaaagagacg
ctggtggagtatggtttccgtctgccgtcggcgctggataaccgtccgctgaaatttgaa
gagtttgaagcgctggcaccacagtctatctatgtttcggcgacgccgggcaattacgag
ctggagaaatccggcgatgaagtgattgaccaggtcgttcgtccgacaggtttgctggat
cccatcatcgaagtgcgcccggtcgctacgcaggttgacgatctgctgtcggaaattcgc
atccgcgcggccattaacgagcgcgtgctggtgacgacgttgaccaagcggatggcggaa
gatctcaccgaatatctggaagagcacggtgagcgggtgcgttatttgcactcggatatt
gatacggttgaacgtatggaaattatccgcgacctgcgtcttggcgagtttgatgtgctg
gtgggcatcaacctgctgcgcgaagggctggatatgccggaagtgtcgctggtggcgatt
ctggatgcggacaaagagggcttcctgcgttcggagcgttcactgattcagaccattggc
cgcgcggcgcgtaacatcaacgggaaagcgattctgtacggcgataagatcacaccgtcg
atggcgaaagcgatcggagaaaccgaacgtcgccgtgaaaaacagcacgcctataacgtc
aagcacggcataacgccacagggcctgaacaagaaggtggtggatattctggcgatgggc
gaagggctggcgaaaacgcgtgcgaaagggcgtggcaaaacccgcaccccggcgcaggtg
gaagcggcagaactggcgctgacgccgaaagcgctgcaacagaaaatccacgagctggaa
gggctgatgatgcagcatgcgcagaatctggaattcgaagaggcggcgcaggtacgcgat
caactgcaccagttacgtgaactgtttattgtcgcatcttaa
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