Kordia sp. SMS9: KORDIASMS9_03063
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Entry
KORDIASMS9_03063 CDS
T05562
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
kos
Kordia sp. SMS9
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Flavi_DEAD
Helicase_C_2
DUF3598_C
Motif
Other DBs
NCBI-ProteinID:
AXG70817
UniProt:
A0A345H2M9
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Position
complement(3535718..3538561)
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AA seq
947 aa
AA seq
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MHKPTIAAGQRITTRGEDFLVTNVVNNSDNSQLLDAEGISELVKGKRFTFDTKIDTEIKP
VDPNDTIFIADTGNGYRKSKLYIETHIRNSALYSDKITIASKAAFNLSEYQLTPTLTALQ
LPRPRLLIADGVGLGKTIEVGIFIAEMMKRGKGKRIMVLALKSILGQFQQELWNRFAIPL
MRLDSQGIAKIKDVLPSNKNPFDFYDKTIVSIDTLKNNAKFRHYIEKSRWDIIVIDECHT
VANNQSQRGNLAQFLAKQCESLILTSATPHNGKKESFANLINMIEPTAIPKSGNYTKEDV
APFYVRRFKNDITEDAVKANFQDREIIRLETDLSAQEIAFLRYQQGLKLQGLDALQRQKS
KDDLLFSIMIFKAFMSSPKAALESIQNRIEKVRDISQPSKKFEDSLDILQTLETHLQQII
ATKADSKYKKFTHTLQQLGWSGKKKDDRYVVFAERIATLAYLKENLMRDFGIKEDAIQSF
SGSDSDVEQQQIIEDFGKEDSKVRILLCSDAGSQGVNLHYYCNHMFNYDIPWSLITLEQR
NGRIDRYGQTKTPYIYYLVGKTKDEALRTDLHIINNLTKKEEEKHKTLGDIGAVMQLYNA
QEETNKVIEALEQQDEDFLEEEAFDYSIGIFDESEETAAIITEHPYEAPSTIFSKDFDFY
EALFKQLHSDQLIKASEYTFHSEDEYLELTNTKELHKILYDLPPESKPKINEVFKLTTDK
ALVQQAIAEARKKKGDWAAFQILYDLHPAIRFYMTKLEASVPKNQALAAKFSNKLPENTA
WYILQGQTSNNLGQPVIADFFVVGVSESNVIDCLSITDFVKKYKLIENVYNEEITADELQ
HLQTQLPIAINYAKNKHMKTLQGALSKVMFSKLVAQEEKLEQWEQSSLQQLDLKFENTAD
TNFMQERKKKEIDEIKTIASKSSQYIQNALALKAEAYINVMAVFYNA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaccaaccattgccgcagggcaacgaatcactacccgaggtgaggatttctta
gtaaccaacgtcgtcaacaattcagacaacagtcaactactcgatgcagaaggaatcagt
gagttggtgaaaggaaagcgttttacatttgataccaaaattgatacggaaataaaaccc
gtagatcccaacgataccatttttattgccgataccggaaacggttaccgcaagtcaaaa
ctctatatagaaacgcacatccgaaattcagccttgtattcagataaaattaccattgcg
tccaaagcggcattcaatctgtctgaataccaacttacacctaccttaactgcattgcaa
ttaccgcgtccacgattgcttattgccgatggtgtaggattgggaaaaactattgaagta
ggcatctttattgctgaaatgatgaaacgtggaaaaggaaagcgcatcatggttttggca
ttaaaatctatattaggacagtttcaacaagaattatggaatcgctttgccattccgttg
atgcgattggacagtcagggaattgctaaaattaaagacgtcctgccttccaataaaaat
ccatttgatttttatgataaaacgattgtgtcaattgacaccctaaagaacaacgcaaag
tttcgacattatattgaaaaatcgcgctgggatattattgtcattgacgaatgtcatacg
gtggcaaacaatcaaagtcagcgcggaaacttggcacaattcttagccaaacaatgcgaa
tcattgattttgacttctgccacacctcataacgggaaaaaagaaagctttgccaacctc
attaacatgattgaacccacagcaattcccaaaagtggcaactataccaaagaagatgta
gctccgttttatgtacgtcgctttaaaaatgacattacagaagacgccgtaaaagccaac
tttcaagaccgtgaaatcattcgtttggaaacagacttgtctgcgcaagaaattgccttt
ctacgctaccaacaaggattaaagttgcaaggcttggatgcgttgcagcgtcaaaaatca
aaagatgacctgttgttttccatcatgattttcaaagctttcatgtcttcaccaaaagct
gcgttagagagcattcaaaaccgtattgaaaaggtgcgcgacatcagtcaaccttcgaaa
aaatttgaagacagtttggacattttgcaaacattagaaacacatttacaacaaatcatt
gcaaccaaggcagacagtaaatacaaaaaatttacacacactttgcagcaacttggctgg
tcgggcaaaaagaaagacgatcggtatgtagtatttgccgaacgcattgccacactcgcc
tatcttaaagaaaatttaatgcgcgattttggcatcaaagaagacgccatacaatcgttt
agtggttccgactcagatgtagaacaacaacaaattatagaagattttggaaaggaagac
agcaaggtgcgtatcctactctgttcagacgcaggttcgcaaggtgtcaatttgcattac
tactgcaaccacatgtttaactacgacattccttggtcgctcatcactttggagcaacgc
aacgggcgtatagatcggtatggacaaactaaaacaccctacatctattatttggtagga
aaaacgaaagatgaagcgttgcgaaccgatttacacatcattaacaatcttaccaaaaaa
gaagaagaaaaacacaaaacactgggcgatattggtgctgtgatgcaactttacaatgcc
caagaagaaaccaataaagtaattgaagccctagaacagcaagacgaagacttcttggaa
gaagaagcgtttgactatagcattggtatttttgatgaatcggaagaaaccgccgccatc
attaccgaacatccttatgaagcgccaagtaccatttttagcaaagattttgacttttac
gaagcgctattcaagcaattgcacagcgatcaactgataaaagcttccgaatacaccttt
cacagtgaagacgaatacttggaactgaccaataccaaagagttacacaaaattttatat
gacttgccgcccgaatccaagccaaaaattaatgaggtttttaaactaactaccgacaaa
gcgctggtgcagcaagcaattgccgaagcgcgtaagaaaaaaggcgattgggcagcgttt
caaatattgtacgacttacaccctgccattcggttctacatgaccaaactggaagccagc
gtacccaaaaaccaagcattggcagcaaaatttagcaataaactgcctgaaaacaccgcg
tggtacatcttgcaaggacaaacctctaacaatttagggcaacctgttatagccgatttc
ttcgtagtcggtgtgtccgaatcaaacgtaatagattgcttgtctattacagattttgta
aagaaatacaaactgattgaaaacgtgtacaatgaagaaattactgccgacgaattgcaa
cacttacaaacacaactgcccattgctattaactatgcaaaaaacaagcacatgaaaacc
ttgcaaggagcgctttcaaaagtaatgtttagcaaattggtagcacaagaagaaaaacta
gaacaatgggaacaatcttccctgcaacaactcgatcttaaatttgaaaatacggcagac
accaactttatgcaggaacgcaaaaagaaagaaatagacgaaataaaaaccattgccagc
aaatcaagtcaatacattcaaaatgcattggcgttaaaagctgaggcatacattaacgtc
atggcggtattttacaatgcataa
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