Klebsiella michiganensis HKOPL1: J415_11665
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Entry
J415_11665 CDS
T03188
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
koy
Klebsiella michiganensis HKOPL1
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koy03400
]
J415_11665
DNA repair and recombination proteins [BR:
koy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
J415_11665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
UPF0547
SLFN-g3_helicase
zf-tcix
zinc_ribbon_2
AAA_22
AAA_16
zf-ribbon_3
DZR
Motif
Other DBs
NCBI-ProteinID:
AHW87846
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Position
complement(2453587..2455344)
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AA seq
585 aa
AA seq
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MTFTLRPYQKEAVDATLAWFRRHHEPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDQFQGEFSLLIVDECH
RISDDDDSQYQQIISHLQQVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDENALFRD
CIYELPLRYMIKNGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQQRVTPH
IVSQIVEFAQTRKGVMIFAATVEHAREVTGLLPQGEAALITGETPGPERDRIIDAFKAQQ
YRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGRSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDALVLRCSGMD
LQHGADDKGAWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITP
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYQGRFRRANELR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacattacgtccctaccaaaaagaggcggtcgacgcgacgctcgcctggttt
cgccgccatcatgaacctgccgcgattgtgctgccgacaggcgcaggtaaaagcctggtt
atcgccgaacttgcgcgcctggcgcgcggtcgcgtgctggtgctggcgcacgttaaagag
ctggtggcgcagaaccacgccaagtattgcgcgctcggcctggaagcggatattttcgcc
gcgggcctcaagcgtaaagagagccacggtaaagtggtctttggcagcgtgcagtcggtc
gcccgcaacctcgaccagtttcagggcgagttttcgctgctgatcgtcgacgagtgccac
cgcatcagcgacgatgatgacagccagtatcagcagattatcagccaccttcagcaggtc
aatccgcacctgcgcctgctggggctgaccgcgacgccttttcgcctcggtaaggggtgg
atttaccagttccactaccacggcatggtgcgcggtgatgaaaacgcgctatttcgcgac
tgtatctacgagctgccgctgcgctatatgattaagaacggctacctgacgccgccggag
cggctggatatgccggtggttcaatatgacttcagccgcctgcaggcgcaaagtaacggc
ctgttcagcgaggctgatttaaaccacgaactgaaaaaacagcagcgcgtcacgccgcat
atcgtcagccaaatcgttgaatttgcccaaacgcgcaaaggggtgatgattttcgccgcc
accgttgaacacgcccgcgaagtgaccgggttgcttccgcagggcgaagcggccttaatc
accggtgaaacgccggggccggagcgcgatcgcatcatcgacgcgtttaaagctcagcag
taccgctatctggttaacgtcgcggtactgacgaccggctttgatgcgccgcatgtcgat
ctgatcgctatcctgcgcccgaccgagtcggtgagcctttaccaacagatcgtcggccgc
ggcctgcgcctggcgccgggtaagacggactgcctgattctcgattacgccgggaatccg
cacgacctttacgcgcctgaagtgggaacgccgaaggggagaagcgacaacgtgccggtc
caggttttttgcccggcatgcggtttcgccaataccttctgggggaaaaccaccgccgac
ggcacgctgattgaacactttggccgccgctgccagggctggtttgaggatgacgaaggc
catcgcgagcagtgtgattttcgttttcgctttaaaaactgcccgcagtgtaacgcggaa
aacgatatcgccgcccgccgctgccgcgagtgcgataccatcctggtcgaccccgacgac
atgctgaaagccgcgctgaagcttaaagacgcgctggtgctgcgctgtagcggtatggat
ctgcagcacggcgcggatgacaaaggcgcctggctaaaaattacctattacgatgaagat
ggcgcggatgttagtgagcgcttccgcctgcatacgcccgcccagcgtaccgcctttgag
cagctctttatccgcccgcatacccgaacgccgggcgtgccgctgcgctggataacgccc
gccgatatcctcgcccagcaggcgcttctgcgccatccggactttgtcgtggcgcgcatg
aaggggcaatactggcaggtgcgggagaaagtatttgattatcagggccgattccgccgg
gccaacgaactgcgctaa
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