Klebsiella michiganensis HKOPL1: J415_22590
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Entry
J415_22590 CDS
T03188
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
koy
Klebsiella michiganensis HKOPL1
Pathway
koy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J415_22590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koy03400
]
J415_22590
DNA repair and recombination proteins [BR:
koy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J415_22590
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J415_22590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AHW89911
LinkDB
All DBs
Position
complement(4720475..4722490)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHIESTIPR
FTVYPKTHYVTPRERIVQAMEEIKVELSERRKRLLENNKLLEEQRLSQRTQFDLEMMHEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLD
PVIEVRPVGTQVDDLLSEIRIRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALG
QNIAKTKTKGRGKSRSPVEADVVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRELFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaagctgcattctgctttccgtccctccggcgatcagccggaagcc
attcgtcgcctggaagaggggctggaagatggcctggcgcatcaaaccctgctcggggtc
accggctcaggtaaaacgtttaccatcgccaacgtcattgctgacctgcagcgtccgacg
atggtgctggcgccaaacaaaaccctggcggcgcagctatacggcgaaatgaaagagttc
ttcccggagaacgcggtggagtatttcgtctcgtactacgactactaccagccggaagcc
tacgtgccaagctcggacaccttcatcgagaaagatgcgtcggtgaacgaacatattgaa
cagatgcgtctgtcggcgaccaaagcgctgctggagcgtcgcgacgtggtggtggtggcc
tcggtctccgctatctacggtctgggcgatccggatctgtatctgaaaatgatgctgcat
ctgacggtcggcatgattatcgaccagcgcgctattttgcgccgcctggccgagctgcag
tatacccgcaacgatcaggccttccagcgcggtaccttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggagtctgacgatatcgcgctgcgcgttgagctgttcgatgaggaa
gttgagcgcctgtcgctgttcgatccgctgaccggtcatattgagtcgacgatcccgcgc
ttcaccgtttatcccaaaacccactacgtcaccccgcgcgagcgtatcgtccaggcgatg
gaagagattaaagttgaactgtcggagcggcgtaagcgattgctggagaacaacaagctg
ctggaagagcagcgtctgagccagcgtacgcagttcgacctcgaaatgatgcacgagctg
ggctactgctcggggattgaaaactactcgcgctatctgtcgggccgcgggccgggcgaa
ccgccgccgacgctgtttgactacctgccggccgatggtctgctggtcatcgatgagtcc
cacgtcacgatcccgcagatcggcggtatgtaccgcggggaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctgccgtcggcgctcgataaccgtccgctcaagtttgaa
gagtttgaggccctggcgccgcaaaccatctatgtttcggcgacgccgggagcctatgag
ctggataaatccggcgacgaggtggtggaccaggtcgtccgtcctacggggctgctggat
ccggtcatcgaagtgcgtccggtaggcacccaggtcgacgatctgctctcggaaattcgc
atccgcaccgcgatcaacgagcgcgtgctggtcacgacgctgaccaaacgcatggcggaa
gatttaaccgaatatctggaagagcacggcgagcgggtgcgctacctacactcggacatc
gacaccgtggagcgcatggagattatccgcgacctgcgcctcggcgagtttgacgtgctg
gtggggatcaacctgctgcgtgaaggtttggatatgccggaagtttcgctggtggcgatc
ctggatgccgataaagaaggcttcctgcgctctgaacgctcgctgattcagaccattggc
cgcgcggcgcgaaatatcaacggcaaagcgattctctacggcgataaaattaccccgtcg
atggcgaaagcgatcggggaaaccgagcgccgccgcgagaagcagcaggcgtacaacgaa
gagcacggtatcgttccgcagggtctgaataagaaagtggtcgatattctggccctcggt
cagaatatcgcgaaaaccaaaaccaaggggcgcggcaagtctcgctcaccggttgaggcg
gatgtcgtcgcgctaacgccgaaggcgctccagcagaagattcacgagctggaagggcag
atgatgcagcacgcgcagaacctggagttcgaagaggcggcgcaaattcgcgaccagctt
caccagctgcgcgagctgtttatcgccgcttcgtag
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integrated database retrieval system
