Kordiimonas sp. SCSIO 12610: KFF44_07930
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Entry
KFF44_07930 CDS
T08324
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
koz
Kordiimonas sp. SCSIO 12610
Pathway
koz01501
beta-Lactam resistance
koz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFF44_07930
01503 Cationic antimicrobial peptide (CAMP) resistance
KFF44_07930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
koz02000
]
KFF44_07930
01504 Antimicrobial resistance genes [BR:
koz01504
]
KFF44_07930
Transporters [BR:
koz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KFF44_07930
Antimicrobial resistance genes [BR:
koz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KFF44_07930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UTW56803
LinkDB
All DBs
Position
1728850..1731954
Genome browser
AA seq
1034 aa
AA seq
DB search
MLLSDVSVKRPVFATVLSLLLIAFGLISFQELSVRELPDVDPPVVSIQTNYPGANAAIVE
TRITQIVEGSIAGVPGIKTIDSTSSDGRSNVNIEFTLERDIDAAANDVRDRVSRILNNLP
EEVDPPEVSKADGDTRPIMFFVLTSPVMDLLQLTDFAERNIVDRVSVVDGVAGVRIFGRQ
RYAIRIHLDRQAMAARGVAVADIERALRAENIELPAGRIESIKRDTIVRVNREYTQPQEF
NEIVIREDSDGNFVRLGDVGRVELGAEREQTQFRGNGVPVIGIGIVKQSTANTLSVAQGA
KAEIEKIKQTLPESMTIETSFDSSIFIEKAIDEVYFTLAVAMGLVVLVLYLFLGNLKTVL
VPAVTVPVCIIASFWVLNLAGVSINLITLLALVLAIGLVVDDAIVVLENIYRRVEEGEPG
LVAAYRGAKQVGFAVIATTLVLIGVFVPISFLSGNIGRIFGELAVTMTAAIAFSSLVALS
LSPMMCSILVRRRNKKPEFSKKLDRGFTRLQDGYGRLLEVCIDNKLLISACFLVFFVLIY
GIQSKIPQELAPTEDRSSFIMRVQGPQGASFEFMREQALIAEQQVLPLVESGEVERVLLR
VDGSGGFGFVILPPWEERERSAGEIANELRGKFSQNVPGMRVIPFQRSGLGQRGGGSEAF
QFVIGGDTYDDLGRYKQVMLEELGNYPGLVNVDADYRETQPQFNVKIDRKRASDIGVSIQ
TIGSTLETMMGGRRVTTFERGGEEYDVILQAEKEDRQQPLDMTNIHVTSSVTGQLIPLSN
LVTVEEVSGAGALRRFNRVRALTISGNVAPGYTLGQVIADVEQMTRDAIPDVTTIDYKGA
TREFLEAGDDIYFIFALALVVVFLILAAQFESFIHPFVIMLTVPLAVFGGLLGLYMWGST
LNIYSQLGMIMLIGLAAKNGILIVEFANQLRDEGMDVRTALMDASKTRLRPIMMTGISTA
IGALPLMLASGAGSASRQTIGVVVFGGVIVATFFTLFIVPVFYDMLAKYTKSPGHVASQL
EDFEEKEKAGVPAE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgttattatctgatgtttccgtaaaacgcccggttttcgcgacagtccttagcctcctt
cttattgctttcgggcttatctcatttcaggaactgtcggtaagagaattgccagacgtt
gatccgccggtggtttctattcaaaccaattacccaggcgcgaacgcagctattgttgaa
acacgcataacgcaaattgttgaaggcagtatcgctggtgtcccgggtattaaaacgatc
gattcaacaagtagcgatggccgctctaacgtaaatattgaatttacattagaacgggat
attgatgccgcagcaaatgacgttcgtgaccgtgtcagcaggattttgaacaacctcccg
gaagaggtagatccgcccgaggtttccaaggcagacggggacacgcgccccattatgttt
tttgtcctaaccagcccggttatggatttgttgcagctaactgattttgctgaacgaaat
attgtagaccgggtgtcggtggttgatggtgtagctggtgttcgtatttttggccgccaa
cgctatgctattcgtattcatcttgaccgtcaggcgatggcagcgcggggtgttgctgtt
gcggatatcgaacgggcgcttcgtgctgaaaatattgagctaccggcgggtcggatcgaa
tctataaaacgtgacacaattgttcgggtaaaccgtgaatacacacagccgcaagaattt
aatgaaattgtgatccgcgaagatagcgacggcaattttgttcgccttggtgatgttggt
cgtgttgaactgggtgcagagcgcgagcaaactcagttccgtggtaacggcgtcccggtg
atagggattgggattgtgaaacaatcaacagcgaataccttatcggttgcgcagggcgcg
aaagctgagattgaaaagatcaagcaaacactaccggaaagtatgacgattgaaacgtcc
ttcgacagttcaatctttatcgaaaaagcgattgatgaagtatatttcacactcgctgtc
gcgatggggcttgttgtccttgttttatacttattcctcggcaatctgaaaaccgtattg
gttcctgctgtcacggtacccgtatgcatcattgcaagcttttgggttttaaaccttgct
ggtgtcagcattaacttgattacgcttttagccctcgttttggcgattggcttggtcgtt
gatgatgcgattgtggttctggagaatatttaccgccgtgttgaggaaggcgagcctggc
ctcgttgcagcctacaggggcgctaagcaggttggatttgctgttatcgcgacaacactt
gtattgatcggtgtttttgtgccgatttcattcctatctggtaatattggccgcatcttt
ggtgaactagccgtgacgatgacagcggcgattgccttttcaagcctagttgcgcttagc
cttagcccgatgatgtgttctattctggttcgtcgtcgtaacaagaaacctgagttttcg
aagaaactggatcgcggattcacccgactacaagatgggtatggccgcttgttggaagtt
tgtatcgacaataagcttttgatttccgcatgtttccttgtgttctttgtgcttatttac
ggcattcagtcaaaaatccctcaggaacttgcaccaacagaagatcgcagtagcttcatt
atgcgcgtgcaggggccacagggcgctagctttgaatttatgcgcgagcaagcactgatc
gcggaacaacaggtcttgccacttgttgaatctggtgaggtagagcgtgttctcctgcgt
gttgatggaagtggtggctttggctttgttatacttcccccttgggaggagcgtgaacgt
tctgctggtgaaattgcaaatgaactgcgcggtaagttctcgcagaatgttcctggtatg
cgcgttattccattccaacggtctggtcttggtcagcggggcgggggctcggaagcgttt
cagttcgtaattggtggtgatacctatgacgaccttggtcgctacaagcaagtgatgctt
gaagaacttgggaattatccaggccttgttaacgttgatgcggattaccgtgaaacccag
cctcaatttaatgtaaaaattgatcgcaagcgtgcgtctgatattggtgtctctatccag
acaattggtagtacgctcgagacgatgatgggcggacgtcgcgtaacaacgtttgagcgt
ggcggcgaggaatatgatgttattcttcaagctgaaaaggaagatcgtcagcaaccgcta
gatatgacgaatattcatgtgacgtcttcggtgactggtcagttaattccgctgagtaac
cttgttacagtagaagaagtttccggtgctggtgcgctgcgccgctttaaccgtgttcgt
gcactgacgatcagtggtaatgttgcccctggttacacactcggacaagtgattgctgat
gttgagcaaatgacacgggatgcgataccggatgtcacaacaattgattataagggtgcg
acgcgcgaatttttagaagccggcgatgatatttacttcatctttgcacttgcgcttgtg
gttgtgttcctgattttggcagcacaattcgaaagcttcatccacccgtttgttatcatg
ttaacggtaccacttgcagtattcggtgggttgcttggtctgtatatgtggggcagcacg
cttaatatctatagtcagcttgggatgatcatgttgatcggtttggctgccaaaaacggc
attttgattgtcgagtttgcaaaccagctccgcgatgaaggcatggatgtaagaacggcc
ttaatggatgcttcaaaaacacggctgcgcccgattatgatgacgggtatttcaacagcg
attggcgcacttccattgatgttggcatctggtgcagggtctgcgagccgtcagacaatt
ggcgttgtcgtgttcggcggtgtgattgttgcgaccttctttacgttgtttatcgtgccc
gttttctacgatatgctagcgaaatatacgaaatctcctggtcatgtagcgtctcagcta
gaagactttgaagagaaggaaaaagcaggtgtacctgctgaataa
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