Keratinibaculum paraultunense: JL105_08120
Help
Entry
JL105_08120 CDS
T07032
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kpar
Keratinibaculum paraultunense
Pathway
kpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL105_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpar03400
]
JL105_08120
Enzymes [BR:
kpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JL105_08120
DNA repair and recombination proteins [BR:
kpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JL105_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
HHH_2
T2SSE
nSTAND3
HHH_3
PIF1
SLFN-g3_helicase
AAA
MeaB
RsgA_GTPase
AAA_28
PhoH
NTPase_1
UvrD-helicase
DEAD
AAA_29
AAA_16
DNA_pol_lambd_f
UvrD_C
AAA_14
AAA_7
KTI12
SKI
SRP54
ABC_tran
MobB
TrwB_AAD_bind
5_3_exonuc
Thymidylate_kin
HerA_C
cobW
ATP_bind_1
RNA_pol_A_CTD
ATPase_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQY79150
LinkDB
All DBs
Position
complement(1649838..1652051)
Genome browser
AA seq
737 aa
AA seq
DB search
MLTLEGMVEEIIFRNELNSYTVATLDTSDGKATIVGYVPFINTGETVKVEGNWVYHPNYG
EQLEIVNIWTVTPSTINGIEKYLSSGLIPYIGPKTAKRIVKRFGLDTLDVIQYNPEKLKE
IEGIGDKKLEKIVKAFEEQGELRDIMVFLQQYGITPNYGTRIYKKYGKDTIKIISQNPYK
LSEDIFGIGFKTADKIAQNMGIDKKSPYRVEGGIRYILIKYAGAGHSYVPKNELIKGTSE
LLEIEEELIEESLRNLAIKGTVHILNIEEEAIVYYTPFHVAENNVSKKIVELSRVELKDL
DIDVEKAINIIEKEDGIKFAKKQVEAIKESLENGLVVITGGPGTGKTTTINAIIKIFEKE
GLKINLAAPTGRAAKRMTETTGREAKTIHRLLEYSFMEEEIPFGVNEDSPLDTDLLIIDE
ASMIDILLMNNLLKAIMPGTRLILVGDVDQLPSVGAGNVLKDIIESGVVKVVKLDEIFRQ
AEESMIVVNAHRINRGEYPYLNEKDKDFYFIQEPNPKHIVDTIVELCKYRLPDYYGIDPL
KDIQILSPMKKGEVGINVLNQRLQEALNPKSFGKKEKQIGDVIFRVGDKIMQIKNNYSTE
WEIIEDGKLKEKGEGVFNGDLGFILDIDEDNRIMKVLFDEEKEVEYSFNQLDELKLSYAI
TVHKSQGSEFPVVVMPIHWGPPMLMTRNLLYTAITRAKKLVVLVGEEKYLKFMIKNNRIA
KRYSSLDYKIRNVFTMF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
ttgttaacactagaaggcatggtagaagaaataatatttagaaatgaacttaattcctat
actgtggctactttagatacttccgatgggaaggctactatagtaggatatgtccctttt
ataaacacaggagaaacagtaaaagtggaaggaaattgggtatatcatccaaattatgga
gaacagttagaaattgtaaatatatggacggtaactccatctactataaatggaatagaa
aaatatctatcttcaggattaattccctacataggaccaaagactgctaaaaggattgta
aagagatttggactagatactttagatgtaattcaatataatccagaaaaacttaaggaa
atagagggcataggggataaaaaattagaaaagattgtaaaggcgtttgaagaacaagga
gagcttagggatataatggtattcttacaacaatatggtataactcctaattatggcaca
aggatatataaaaagtacggaaaggatactataaagataatatctcaaaatccatataag
ctctctgaagatatatttggaattggatttaaaacagctgacaagattgctcaaaatatg
ggaatagataaaaaatctccttatcgtgtagaagggggcattagatatatattaatcaaa
tatgcaggagcaggacatagttatgtgcctaagaatgaattgattaaaggtacaagtgaa
ttattagaaatagaagaagaattaatagaggaatctttaagaaatttagccattaaggga
actgtacatatattaaatattgaagaagaagctattgtgtactatactccctttcatgtg
gcagaaaataatgtaagtaaaaagatcgtggaattatcaagagtagagcttaaagattta
gatatagatgtagagaaagccataaatatcatagaaaaagaagatggtattaagtttgca
aaaaagcaagtggaagctataaaggaatctttggaaaatggactagtagtaattacaggg
ggaccaggaacagggaaaactaccactataaatgctataataaagatatttgaaaaagaa
ggtttaaagattaacttagcagctcctacagggagggctgctaaaaggatgacagaaact
actggaagagaagcaaagactattcataggttattagaatactcctttatggaagaggag
ataccttttggagtaaacgaagattctccattggatacagatttacttataatagatgaa
gcttctatgatagatatactacttatgaataacttattaaaagccataatgcctggtact
agattaatattggtaggagatgtggaccaattgccatcagtgggagcaggaaatgtactt
aaggatataatagagagtggggtagttaaagtagtaaaattagatgaaatatttcgtcag
gcagaggaaagtatgatagttgttaatgctcatagaattaacagaggggagtatccttat
ttaaatgagaaagataaagatttttatttcattcaagagcccaatcctaagcatatagta
gatactattgtggaactttgtaaatatagattgccagattattatggaatagatccctta
aaggatatacaaatattatcccctatgaaaaagggagaagtgggtataaatgtattaaac
caacggcttcaagaagcattaaatcctaaatcctttggtaaaaaggaaaagcaaatagga
gatgtaatatttcgcgtaggggacaagataatgcaaataaaaaataattattccactgaa
tgggaaataatagaagatggaaagcttaaggaaaaaggagaaggggtttttaacggagat
ttaggtttcatattggatatagatgaagataatagaattatgaaggttttatttgatgaa
gaaaaggaagtggaatatagctttaatcaattggatgaattaaaattatcttatgctatc
actgttcataaaagtcaagggagtgaattcccagtagtggtgatgcctatacattgggga
ccgccaatgttaatgactagaaatcttctctatactgccatcactagagctaaaaagttg
gttgttttagtaggggaagaaaaatatttaaaattcatgataaaaaataataggattgct
aaaaggtattctagtttagattataagatacgaaatgtatttactatgttctag
DBGET
integrated database retrieval system
