Klebsiella pneumoniae blaNDM-1: FH42_07840
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Entry
FH42_07840 CDS
T03440
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
kpb
Klebsiella pneumoniae blaNDM-1
Brite
KEGG Orthology (KO) [BR:
kpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpb03009
]
FH42_07840 (yebU)
Enzymes [BR:
kpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
FH42_07840 (yebU)
Ribosome biogenesis [BR:
kpb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FH42_07840 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AIJ40617
UniProt:
A0A060VSR5
LinkDB
All DBs
Position
1583873..1585306
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AA seq
477 aa
AA seq
DB search
MAENTVYFPEAFLAQMRAAMPAHLSFDDFIAACQRPLRRSIRVNTLKISVDDFLSLVAPY
GWQLAPVPWCAEGFWIEREDDDALPLGSTAEHLSGLFYIQEASSMLPVAALFADNRQPER
VMDVAAAPGSKTTQIAARMGNAGGILANEFSASRVKVLHANISRCGISNVALTHFDGRVF
GAALPETFDAILLDAPCSGEGVVRKDADALKNWSPESNLDIAATQRELIDSAFHALRPGG
TLVYSTCTLNREENQSVIEWLLSRYPQAVEILPLGELFPGAADALTAEGFLHVFPQIYDC
EGFFVARLRKTAAIDPLPAPGYKVGKFPFTPLKDREAAAVTAAARAVGLEWDAGHTLWQR
DKELWLFPLALEPLFGKVRFSRIGVRLAELHNKGYRWQHEAVIAFAAPQRAFELSQEEAE
EWYRGRDVYPQTAPGQDETIVTFQGVPLGLAKRVGSRLKNSYPRELVRDGKLFAGKV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaaatactgtctatttccctgaagcgtttctcgctcaaatgcgcgcggcgatg
ccagcgcatctctctttcgacgactttatcgccgcctgtcagcgcccgctacgccgcagt
attcgcgtcaatacgctgaagattagcgtcgatgatttcctctctctggttgccccctac
ggctggcagctcgcgccggtgccctggtgcgcagagggattctggatcgagcgagaggat
gacgacgcgctgccgctgggcagtaccgccgaacatctcagcgggctgttctatattcag
gaagccagttcgatgctgccggtcgccgccctgttcgccgataaccggcagcccgaacgg
gtgatggacgttgccgccgccccgggatcgaaaaccacccaaattgcagcccgaatgggc
aacgcgggcggcattctcgccaatgaattctccgccagccgggtgaaggtgctgcatgcc
aacatcagccgctgcggcatcagcaacgtcgctctgacccacttcgacggccgggttttt
ggcgcggccttgcccgaaaccttcgatgccatcctgcttgacgccccctgctccggcgaa
ggggttgtacgtaaagacgccgacgcgctgaaaaactggtcgccggagagcaacctcgat
atcgccgccactcagcgcgagcttatcgacagcgccttccatgctctgcgccctggcggg
acgctggtgtattccacctgcaccctgaatcgtgaagaaaatcaatcggtcattgagtgg
ctgctgtcccgctatccgcaggcggtggagatcctgccgctgggagagttgtttcccggc
gcagccgacgccttaaccgcggaaggttttctgcacgtttttccgcaaatttacgattgc
gaaggcttctttgtcgcgaggttgcgcaaaactgcggcgatcgatccgctcccggcgcca
ggctataaggtcggtaaattcccgtttacgccgctgaaggaccgggaggccgccgcggta
actgccgccgccagggctgttggcctggagtgggacgcaggccatacgctgtggcagcgg
gataaagagctgtggctgtttccgctggctttggagcccctgttcggcaaggtgcgcttt
tctcgcatcggcgtgcgcctggcggagctgcacaataaggggtaccgctggcagcatgag
gcggttatcgcctttgccgcgccgcagcgcgccttcgagctgtcgcaggaggaagcggag
gaatggtatcgcgggcgcgacgtctatccgcaaaccgcgcctgggcaggatgaaaccatt
gtgaccttccagggcgtcccgctgggcctggcgaagcgcgtcggctcccgactgaagaac
agctatccgcgcgaactggtgcgcgatggaaaactttttgccggcaaggtgtga
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