Pantoea piersonii: N5580_16310
Help
Entry
N5580_16310 CDS
T08710
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
kpie
Pantoea piersonii
Pathway
kpie02020
Two-component system
kpie02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N5580_16310 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N5580_16310 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpie03021
]
N5580_16310 (rpoN)
Transcription machinery [BR:
kpie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N5580_16310 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WBG90621
LinkDB
All DBs
Position
3426274..3427707
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLRFSQQLAMTPQLQQAIRLLQLSTLELQQELQLALESNPLLEQAEVHEEIDSRD
YQEDEVLDTREALEQKEMPDDLPLDATWDEMYTAGTPSGTGTDYQDDELPIYQGETTQSL
QDYLMWQVDLTPFTDTDRAIATSIVDAIDDTGYLTVSLDEILDSMGNDELALDEVEAVLK
RIQRFDPVGVGARDLRDCLLVQLSQFAPTTPMLTEARLIVSNHLDLLANHDFRSLMRVTR
FKEDVLKEAMLLIQSLDPRPGQSVQTGEPEYVIPDVLVRKIGTRWTVELNADSVPRLKIN
QHYAAMGGAARNDSDSQFIRSNLQEARWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGEE
FMRPMVLADIAQAVDMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLISAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggttcagccaacagctggcaatgactccgcagttgcag
caggcaatccggctgctgcagctctctacgcttgagctgcagcaagagctgcagctggcg
ctggagagcaatccgctgctggagcaggctgaagtgcatgaagagatcgacagccgcgac
tatcaggaagatgaggtgctggacacgcgcgaggcgcttgaacagaaagagatgccggac
gatctgccgctcgacgccacctgggacgaaatgtacaccgcaggcacgccttccggcacc
ggcactgactatcaggatgacgagctgccgatctatcagggcgaaacgacccagtcgctg
caggattacctgatgtggcaggtggatctgacccctttcaccgataccgatcgcgctatc
gccacctcgatcgtcgatgctatcgacgataccggataccttaccgtttcgcttgacgag
atcctcgacagcatgggtaatgacgaactggcgctggatgaagtcgaggcggtgctgaag
cgcattcagcgcttcgatcccgtcggcgtcggcgcgcgcgatctgcgcgactgcctgctg
gtgcagctttctcagtttgcgccgaccacgccaatgctgaccgaagcgcgcctgattgtc
agcaaccacctcgatctgctggctaaccacgatttccgcagcctgatgcgcgtaacccgt
ttcaaagaagatgtgctgaaagaggcgatgctgctgatccagtcgctggatccgcgtcct
ggccagtcggtacagaccggcgagccggaatatgtcattcccgacgtgctggtacgcaag
atcggcacgcgctggacggtagaattgaatgccgacagcgtgccgcgtctgaagatcaat
caacactatgccgctatgggcggcgccgcgcgtaacgacagcgacagccagtttatccgc
agcaacctgcaggaggcgcgatggctgattaaaagcctggaaagccgcaacgatacgctg
ctgaaagtaacgcgctgcatcgttgagcagcagcaggcttttttcgagcagggcgaagaa
tttatgcgtccgatggtgctggcggatatcgcgcaggccgtcgatatgcatgagtccacc
atttcgcgcgtgaccacgcagaaatatctgcacagcccgcgcggcatctttgaacttaaa
tattttttctccagccacgtcaataccgaaggcggcggcgaagcctcctcaacggctatc
cgcgcgctggtgaaaaaattaatctcggcggagaaccccgctaaacccttgagtgacagt
aagcttacctccatgttatctgaacaaggcatcatggtggcgcgccgaaccgtcgctaaa
tatcgcgagtctttatctatcccgccctccaaccagcgtaaacagctggtttga
DBGET
integrated database retrieval system
