Klebsiella variicola KP5-1: A593_18505
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Entry
A593_18505 CDS
T03368
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kpk
Klebsiella variicola KP5-1
Pathway
kpk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A593_18505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpk03400
]
A593_18505
DNA repair and recombination proteins [BR:
kpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A593_18505
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A593_18505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
DUF3848
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AIE02420
LinkDB
All DBs
Position
3861241..3863262
Genome browser
AA seq
673 aa
AA seq
DB search
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESTVPR
YTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNIDGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG
QGLAKTKAKGRGKAKAVEPAGLSAVEMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcgtttgttctgcattccgcctttcgcccctccggagaccaaccggaagcc
atccgccgcctggaagaggggctggaggatgggctcgcgcatcaaacgctgctgggggtc
accggctccggtaaaaccttcaccatcgccaacgtgattgccgacctgcagcggccgacg
atggtgctggcgccaaacaaaaccctggcggcccagctctatggcgagatgaaagagttt
ttcccggagaatgccgtcgagtatttcgtctcctactacgattactatcagccggaagcc
tacgtccccagctcagataccttcattgagaaggacgcctcggtaaacgaacatatcgag
cagatgcgcttgtcggcgaccaaagcgctgctcgagcggcgcgacgtggtggtggtggcg
tcagtctcggctatctacggcctcggcgacccggacctgtacctgaagatgatgctgcac
ctgacggtcgggatgctgattgaccagcgcgctatcctgcgccgtctggccgagctgcag
tatacccgcaacgatcaggccttccagcgcggcacctttcgcgtgcgcggcgaggtgatc
gacgtcttcccggcggaatccgacgatatcgcgctgcgcattgagctgtttgatgaagag
gtcgagcgcctgtcgctgttcgacccgctgaccggccacgtggaatcgacggtgccgcgc
tacaccatttatcccaagacccactacgtgacgccgcgggaacgcatcgtccaggcgatg
gaagagatcaagctggagctggcggagcggcgcaaggttctgctggccaacaacaagctt
ctggaagagcagcgcttaacccagcgtacccagttcgacctcgaaatgatgaacgagctg
ggctactgctcgggcattgaaaactactcgcgcttcctttccggtcgcgggcccggcgag
ccgccgcccactctgtttgactatctgccggcagacggtctgctggtgatagacgaatcc
cacgttacggtgccgcagatcggcggtatgtaccggggcgaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctgccgtcggcgctggataaccggccgatgaagtttgaa
gaatttgaagcgctggccccgcaaaccatctatgtctcggcaacccccggcgcctacgag
ctggataaatccggcggcgaagtggtggatcaggtggtgcggccgaccggtctgcttgac
ccgatcatcgaagtgcggccggtagccacccaggtagacgatctgttgtcagagatccgc
ctgcgcacggccatcaacgagcgcgtgctggtgaccaccctcactaagcggatggcggag
gatttaaccgagtatcttgaggagcacggcgagcgggtgcgctatctgcactcggatatc
gacaccgtcgagcgcatggagattatccgcgacctgcgccttggcgagtttgacgtgctg
gtagggatcaacctgctgcgtgaggggctggatatgccggaggtgtcgctggtggcgatc
ctggatgccgacaaagagggcttcctgcgctccgaacgctcgcttatccagaccatcggc
cgcgcggcgcgaaacatcgacggcaaggccatcctttacggcgataagatcaccccttcc
atggccaaagccattggcgagaccgagcgtcgacgggagaaacagcagcgttataacgaa
gagcacggcatcgtaccgcagggcctcaacaagaaagtggtggatatcctgcagttgggc
cagggcctggcgaaaactaaagccaaagggcgcggtaaagcgaaggccgttgagcctgcc
gggcttagcgccgtggagatgacgccaaaagcgctgcagcagaagatccacgagctggaa
gggcagatgatgcagcacgcccagaacctcgagttcgaagaggcggcgcaaattcgcgac
cagttgcatcagctgcgcgagctgtttatcgcggcctcctga
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