Klebsiella pneumoniae Kp52.145: BN49_0987
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Entry
BN49_0987 CDS
T05281
Symbol
rlmD
Name
(GenBank) highly similar to 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TD57)
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpnk03009
]
BN49_0987 (rlmD)
Enzymes [BR:
kpnk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BN49_0987 (rlmD)
Ribosome biogenesis [BR:
kpnk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN49_0987 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Met_10
Cons_hypoth95
MTS
Methyltransf_11
FtsJ
Methyltransf_4
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_12
PrmA
Methyltransf_15
Ubie_methyltran
Methyltransf_32
CMAS
TPMT
Motif
Other DBs
NCBI-ProteinID:
CDO12748
LinkDB
All DBs
Position
1020166..1021470
Genome browser
AA seq
434 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFVSGVLPHEQAEVALVEDKKQ
YARAEVKRRLTDSPQRQAPRCPHFGVCGGCQQQHASVPLQQQSKRAALGRLMKREVDDVI
AGAPWGYRRRARLSLNYQPKTQQLQMGFRQANAKAIVDVVQCPVLVPQLEALLPAVRECL
SALSALRHLGHVELVQADNGPLMVLRHTAALPATDREKLERFSQTHGLSLYLAPQSEILE
HIHGEAPWYTSDGLRLVFSPRDFIQVNDGVNQQMVRTALEWLDLRPEDRVLDLFCGMGNF
TLPLATRAAHVVGVEGVPALVEKGRENAARNGLSNVTFFHENLEEDVTRQAWAKHGFDKV
LLDPARAGAPGVMPHIIKLAPRRVVYVSCNPATLARDSETLLQAGYQIQRLAMLDMFPHT
GHLESMVLFERRLT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgtgtgacgacgcgccagatcataaccgttaca
gtcaacgacctcgatccctttggtcagggtgttgcccgccaccaggggaaggcgctgttc
gtgagcggcgtgctgccccacgagcaggccgaggtggcgctggtggaagataaaaaacag
tacgcccgcgccgaggtgaaacgccgactgaccgacagcccgcagcgccaggcgccgcgc
tgcccccattttggcgtctgcggcggatgccaacaacaacatgccagcgttccgcttcag
cagcaaagtaaacgcgccgcgctggggcgactgatgaagcgcgaggtagatgacgtcatc
gccggcgcgccgtggggctaccgccgtcgcgcacgcttgagcttgaattatcagccgaag
acccaacaattgcagatgggttttcgccaggccaacgccaaagcgatcgtcgatgtggtg
cagtgccctgttttggtgccccaacttgaggcattgctgcccgccgtgcgcgagtgctta
agcgcgctgagcgcattacgccatctcggccacgtcgagctggtgcaggcggacaacggt
ccgctgatggtgctgcgccataccgcagccctgccggcgacagacagggaaaaactggaa
cgcttttcgcaaactcacggtctttccctgtacctcgcgccacaaagcgagatactggag
catattcatggcgaagcgccatggtatacctcagacggactacgcttagtgttcagcccg
cgggattttatccaggtcaacgacggcgtaaatcagcagatggtgcgtaccgcactggag
tggctggatctgcggccagaggaccgggtgctggatctgttctgcgggatgggcaacttt
accctgccgctggcgacacgcgccgcccatgtggtgggcgtggaaggggtgccagcgctg
gtggagaaggggcgggaaaacgccgcccgcaatggtttatcaaatgtcactttcttccat
gaaaatctggaagaagacgtcacccgtcaggcctgggcgaagcacggctttgataaagtg
ctgctggacccggcccgcgccggcgcgccgggcgtgatgccgcatataataaaactggca
ccgcggcgggtggtgtatgtttcctgcaacccggcgacgctggcgcgagacagcgaaacc
ctgttgcaggctggatatcagattcaacgcctggcgatgctggatatgttcccgcatacc
ggccatctggaatcaatggtgttgtttgagcgcaggcttacataa
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