Klebsiella pneumoniae subsp. rhinoscleromatis SB3432: KPR_0300
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Entry
KPR_0300 CDS
T02793
Symbol
rpoB
Name
(GenBank) highly similar to DNA-directed RNA polymerase subunit beta from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGP0)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpr
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
Pathway
kpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPR_0300 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpr03021
]
KPR_0300 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpr03400
]
KPR_0300 (rpoB)
Enzymes [BR:
kpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPR_0300 (rpoB)
Transcription machinery [BR:
kpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPR_0300 (rpoB)
DNA repair and recombination proteins [BR:
kpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPR_0300 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
CCI74532
UniProt:
R4Y490
LinkDB
All DBs
Position
327088..331149
Genome browser
AA seq
1353 aa
AA seq
DB search
MGRLVSELRNPMVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGL
EAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREA
PEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGK
VLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVV
FEIRDNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPV
EYIAGKVAAKDYIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISE
TVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSL
LRDEIEGSGILSKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLV
RVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRR
ISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLET
PYRKVTNGVVTDEIHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQ
VDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVA
VDSGVTAVAKRGGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMP
CVSLGEPIERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFT
TIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTP
KGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIE
EMQLKQAKKDLSEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQN
QLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGR
HGNKGVISKINPIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKIN
AMLKQQQEVAKLREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDG
AKEAEIKELLQLGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTG
SYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIV
DGNHQMEPGMPESFNVLLKEIRSLGINIELEDE
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgacttgtcagcgagctgaggaaccctatggtttactcctataccgagaaaaaa
cgtattcgtaaggattttggtaaacgtccacaagttctggatgtgccatatctcctttct
atccagcttgactcgttccagaagtttatcgagcaagatcctgaagggcagtatggtctg
gaagctgctttccgttccgtattcccgattcagagctacagcggtaattccgagctgcaa
tacgtcagctaccgtctgggcgaaccggtttttgacgttaaagaatgtcagatccgtggc
gtgacttattctgcaccgctgcgcgtaaaactgcgtctggtgatctacgagcgcgaagcg
ccagaaggcaccgtcaaagacattaaagaacaagaagtctacatgggcgaaattccgctc
atgaccgacaacggtacctttgttatcaacggtaccgagcgtgttatcgtttctcagctg
caccgtagcccgggcgtcttctttgacagtgacaaaggtaagacccactcctccggtaag
gttctgtataacgcacgtatcatcccttaccgcggttcctggctggacttcgaattcgac
ccgaaagacaacctgttcgttcgtatcgaccgtcgtcgtaagctgccggctaccatcatc
ctgcgcgcgctgaattacaccactgagcagatccttgacctgttcttcgaaaaagtggtc
tttgaaattcgcgacaacaagctgcagatggagctgattccggagcgtctgcgcggtgaa
actgcctccttcgatatcgaagccaacggcaaagtgtacgttgagaaaggccgtcgcatc
acggctcgtcatatccgtcagctggaaaaagacgatatcaagcatatcgaagtgccagtt
gaatatatcgcgggcaaagtggcggctaaagactatatcgatgaagcgactggcgaactg
atctgcccggcgaacatggagctgagcctggatctgctggctaagctgagccagtctggc
cacaagcgtatcgaaacgctgttcaccaacgatctggaccacggcccgtacatctctgaa
acggtacgcgtcgacccgactaacgatcgtctgagcgcgctggtagaaatctaccgcatg
atgcgccctggcgagccgccgactcgtgaagccgctgaaagtctgtttgagaacctgttc
ttctctgaagaccgctacgatctgtccgcggttggtcgtatgaagttcaaccgttctctg
ctgcgcgacgaaatcgaaggttccggtatcctgagcaaagacgacatcatcgaagtgatg
aagaagctcatcgatatccgtaacggtaaaggcgaagtggacgatatcgaccacctcggc
aaccgtcgtatccgttccgttggcgaaatggcggaaaaccagttccgcgttggcttggta
cgtgtagagcgtgcggtgaaagagcgtctgtctcttggcgatctggataccctgatgcct
caggatatgatcaacgccaagccgatttccgcagcagtgaaagagttctttggttccagc
cagctgtctcagtttatggaccagaacaacccgctgtctgagattacgcacaaacgtcgt
atctccgcactcggcccaggcggcctgacccgtgagcgcgcaggcttcgaagttcgagac
gtacacccgacccactacggtcgcgtatgtccgatcgaaacgcctgaaggtccgaacatc
ggtctgattaactccctgtccgtgtacgcgcagaccaacgaatatggcttccttgagacg
ccgtatcgtaaagtgaccaacggtgtggttactgacgaaattcactacctgtctgctatc
gaagaaggcaactacgttatcgctcaggcgaactccaacctggatgaaaacggccacttc
gtagaagatctggttacctgccgtagcaaaggcgaatccagcttgttcagccgcgaccag
gttgactacatggacgtatccacccagcaggtggtatccgtcggtgcgtccctgatcccg
ttcctggaacacgatgacgccaaccgtgcattgatgggtgcgaacatgcaacgtcaagcg
gttccgactctgcgcgctgataagccgctggttggtaccggtatggaacgtgctgttgcc
gttgactccggtgttactgccgtggctaaacgtggcggtaccgttcagtacgtggatgct
tcccgtatcgttatcaaagttaacgaagacgagatgtacccgggcgaagcaggtatcgac
atctataacctgaccaagtacacccgttctaaccagaacacctgcatcaaccagatgcct
tgcgtgtccctgggcgaacctattgagcgcggcgacgtgctggcagacggcccgtccacc
gacctcggtgagctggcgctgggtcagaacatgcgtgtagcgttcatgccgtggaacggt
tacaacttcgaagactctatcctcgtttccgagcgtgttgtccaggaagaccgtttcacc
actatccacattcaggaactggcgtgcgtgtcccgtgacaccaagctggggccggaagag
atcaccgctgatatcccgaacgtgggtgaagctgcgctctctaaactggatgagtccggt
atcgtttatatcggtgcggaagtgaccggcggcgacattctggttggtaaggtaacgccg
aaaggtgaaacccagctgacgccggaagagaaactgctgcgcgcgatcttcggtgagaaa
gcgtctgacgttaaagactcttctctgcgcgtaccgaacggtgtctctggtaccgttatc
gacgttcaggtctttacccgtgacggcgtagaaaaagacaaacgtgctctggaaatcgaa
gagatgcagctgaagcaggccaaaaaagacctgtctgaagaactgcagatcctcgaagcc
ggtctgttcagtcgtatctacgcggtgctggtctccggtggcgttgaagctgagaagctc
gacaagctgcctcgcgatcgctggctggaactgggcctgaccgacgaagagaaacaaaat
cagctggaacagctggctgagcagtatgacgaactgaaacacgagttcgagaaaaaactc
gaagcgaaacgccgtaaaatcacccaaggcgacgatctggcaccgggcgtgctgaagatt
gttaaggtatatctggccgttaaacgccgtatccagcctggtgataagatggcaggtcgt
cacggtaacaagggtgttatctctaagatcaacccgatcgaagatatgccgcacgatgct
aacggtacgccggtggatatcgtactgaacccgctgggcgtaccgtctcgtatgaacatc
ggtcagatccttgaaactcacctgggtatggctgcaaaaggcatcggcgataagatcaac
gccatgctgaaacagcagcaggaagtcgcgaaactgcgcgaattcatccagcgtgcttac
gatctgggcgctgacgttcgccagaaagttgacctgaataccttcagcgatgaagaagtt
ctgcgtctggctgaaaacctgcgtaaaggcatgccgatcgcaacgccggtattcgacggt
gcgaaagaagctgaaatcaaagagctgctgcagctgggcgacctgccgacttccggtcag
atcaccctgtttgatggccgcaccggtgaacagttcgaacgtccggtaaccgtgggttac
atgtacatgctgaaactgaaccacctggtcgacgacaaaatgcacgctcgttccaccggt
tcttacagcctggttactcagcagccgctgggtggtaaggcacagttcggtggtcagcgc
ttcggtgagatggaagtgtgggcgctggaagcatacggcgcggcctacaccctgcaggaa
atgctcaccgttaagtctgatgacgtgaacggtcgtaccaagatgtataaaaacatcgtg
gacggcaatcaccagatggaaccgggcatgccggaatccttcaacgtactgttgaaagaa
attcgctcgctgggcatcaacatcgaactggaagacgagtaa
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integrated database retrieval system
