Kosakonia pseudosacchari: IP581_06970
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Entry
IP581_06970 CDS
T06897
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IP581_06970 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_06970 (uvrB)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IP581_06970 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IP581_06970 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
IF2_N
AAA_30
UB2H
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOV65384
LinkDB
All DBs
Position
1496104..1498125
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDLALRIELFDEEVERLSLFDPLTGHIESGIQR
FTIYPKTHYVTPRERIVQAMEEIKVELAERRKSLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQSIYVSATPGNYELEKSGSEVIDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
EGLAKTRAKGRGKTRTPAQVEAAELALTPKALQQKIHELEGQMMQHAQNLEFEEAAKVRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttcgtccctccggcgatcagcctgaagct
atccgccgcctcaaggaaggtctggaagacggcctggcgcaccagacgttactcggagtg
acggggtcagggaagacattcaccgtcgccaatgtgattgccgatctgcagcgcccgaca
atggtgctggcaccgaataaaacgctggccgcgcagctgtacggtgaaatgaaagagttc
ttcccggagaacgcggtcgagtatttcgtctcttactacgactactaccagccggaagcg
tatgtgccaagttctgacacctttatcgaaaaagatgcctcggtgaacgaacatattgag
cagatgcgtctgtcagcgacgaaggcgctgctggagcgtcgcgatgtgattgtggtggct
tctgtatctgccatctatggtctgggcgatccggatctctatctgaaaatgatgctgcac
ctgactaagggcatgatcatcgatcaacgcgcgatcctgcgccgcctggcggagctgcaa
tatacccgtaacgatcaggcgttccagcgcggcacgttccgcgtgcgcggcgaagttatc
gatgtgttcccggcggaatctgacgatctggcgctgcgtatcgaattattcgatgaagag
gttgagcgtctgtcgctgttcgatccgctgaccggccatattgagtcgggcattcagcgc
ttcacaatctacccgaaaacgcactatgtgacgccgcgcgagcggatcgtgcaggcgatg
gaagagatcaaagttgagctggccgaacgccgtaagtcgctgctggaaaataataaactg
ctggaagagcagcggctcagccagcgtacgcagttcgacctcgagatgatgaacgagctg
ggctactgctcggggattgaaaactactcgcgctatctttccgggcgcgggccgggcgag
ccgccgccgacgctgttcgactacctgcccgccgatggtctgctggtaatcgacgaatca
cacgtgactattccgcagatcggcgggatgtatcgtggtgaccgcgcgcgtaaagagacg
ctggtggagtatggtttccgcctgccgtcggcgctggataaccgaccgttaaagtttgaa
gagtttgaagcgctggcaccgcagtcgatttatgtttcggcgacaccgggcaattacgag
ctggagaaatcgggcagcgaagtgattgatcaggtggtgcgcccgaccggcctgctcgat
ccggtaattgaagtgcgcccggtggcgacacaggtggacgatttgctctctgaaattcgc
cagcgtgccgccattaacgaacgtgtgctggtgacgacgctgaccaaacgcatggcggaa
gatctcacggaatatctggaagagcacggcgaacgggtacgttatctgcactcggatatc
gacacggttgaacgtatggagattatccgcgatttgcgccttggcgagttcgatgtgctg
gtcggcatcaacttgctgcgtgaggggctggatatgccggaagtctcgctggtggcgatt
ctggatgccgacaaagagggcttcctgcgttctgagcgctcactcatccagacgattggc
cgcgccgcgcgtaacatcaacggtaaagcgattctgtatggtgacaaaatcacgccgtcg
atggcgaaagcgattggtgaaaccgagcgtcgtcgtgaaaaacagcagcgctataacgaa
gagcacggcattaccccgcagggtctgaataagaaagtggtggatattctggcgcttggc
gaagggctggcgaagacgcgtgcgaaagggcgtggtaaaacacgcacacctgcgcaggtg
gaagcggctgaactggcgttaacgccgaaagcgctgcagcagaaaatccacgagctggaa
ggccagatgatgcagcatgcgcagaacctggagttcgaagaggcggcgaaagtacgcgac
caactgcaccagttgcgcgagctgtttattgccgcatcctga
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