Kroppenstedtia pulmonis: GXN76_07740
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Entry
GXN76_07740 CDS
T06617
Name
(GenBank) DNA polymerase domain-containing protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GXN76_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpul03400
]
GXN76_07740
Enzymes [BR:
kpul01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
GXN76_07740
DNA repair and recombination proteins [BR:
kpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GXN76_07740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
QKG84379
UniProt:
A0A7D3XIX2
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All DBs
Position
1602442..1603344
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AA seq
300 aa
AA seq
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MKHKKLVTVENRELYISNPDKVLFPAASLTKWEWILRLTQLAPYLLAYCKGRYLTTIRYP
DGVGGEFFYQKNAPSHTPDWIETAKRGDIRYIILEDTPALIWLANLASLEFHPSFDLSSQ
PDYPTELVFDLDPSVQGFDKVMETAVLVREALQQMGLDGVVKTSGATGLQIYVPILTRYS
FEETRKIGSLIAHYLAEKHPRLITVERTVSKRKDKVYIDFLQHWRGKSLIAPYSTRARSH
AFVSTPLHWEELKPGLVPEMFTPDVVLKRLDAIGDPFSQLYKPESGYDLADILKFIEKGR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaaaacttgttactgtggaaaacagggaactttatatctccaacccggat
aaggtactctttcccgctgcttcattgacaaaatgggaatggatcttacggttgacccag
ttggcaccctatcttctggcttattgtaaagggcgatacttaaccacgattcgttacccc
gatggagtgggaggggagtttttttatcaaaagaacgctccttcccatacaccggattgg
attgaaaccgcaaaacggggagacatccgttatattatactggaggatactcctgccctg
atttggcttgccaacctggccagtttggaattccacccttccttcgatttaagttctcaa
cctgattatccgacagaattagtatttgatttggatccatcggtgcaaggatttgacaaa
gtcatggaaacagcagtacttgtccgggaagcgttgcaacaaatgggactggacggggtt
gtcaagacttcaggtgcaaccgggttgcaaatttatgtaccgatcttaacccgttattcc
tttgaagagactcgtaaaatcggttcattgattgctcactacctggctgaaaaacatccc
cgattgattacagtggagcgtacggtatccaaacggaaagataaggtgtatatcgatttt
ctccagcattggcgcggtaaatccttgattgctccttactccacccgagccagaagccac
gcatttgtgtccacgccccttcattgggaagagttgaaacccggcctggtgccggaaatg
tttacacctgatgttgttttgaaacgacttgatgcaataggagatcccttttctcagtta
tataaacctgaaagtggttatgatctggcggatatcctgaagtttattgaaaagggcagg
tga
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