KEGG   Klebsiella pneumoniae PMK1: PMK1_a00016
Entry
PMK1_a00016       CDS       T03419                                 
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
kpx  Klebsiella pneumoniae PMK1
Brite
KEGG Orthology (KO) [BR:kpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kpx03400]
    PMK1_a00016 (cshA)
Enzymes [BR:kpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PMK1_a00016 (cshA)
    5.6.2.6  RNA 3'-5' helicase
     PMK1_a00016 (cshA)
DNA repair and recombination proteins [BR:kpx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PMK1_a00016 (cshA)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AIT04383
UniProt: G9G2B5
LinkDB
Position
pPMK1-A:complement(20210..22405)
AA seq 731 aa
MSSAYDSLDPRVRKWVYKQGWSTLRPLQESSIPAILARDRDVLISAGTAAGKTEAFFLPA
CSAVADLTNGFGIVYISPLKALINDQYRRLGSLGDALEMPVTPWHGDVPQSKKKKARTNP
AGILLITPESLESLLINSMGWLKQAFSSVAYIVIDEFHAFIGSERGVQLLSLLNRIDHVL
GCQVNPIPRVALSATLGELEKVPEMLRPDKRLPCVTVTDSNSMATLQVQVKGYLERVIQN
EEELQSSAEHDVCADIFRLCRGDSHLVFANSRKRTESIAATLSDMCEEQIVPNEFFPHHG
SLAKELREVLESRLQKGNLPTTAVCTMTLELGIDIGKVKSVIQVTPPHSVSSLRQRMGRS
GRRDSPSVLRMLITENELTVSSSIVDHLRLQLVQSMAMIRLMISKQWFEPADSRQMHYST
LLHQILAITAQWGGVRADQLWSQLCQTGPFRNVDLNDFKSLLKHMGACGLLTQLASGEMV
VGAEGEKLTNHYTFYAVFNTPEEFRIITGNRTLGTVPVDSPLLPDQHIIFGGRRWKVTEI
ETEKKVIYVEATKGGQPPQFSGGGMSVHDAVRQEMLAIYREGDYRIAIGSKKVDYADTAA
RNLFAEGCSNFQRFKLQNECFITSGQHCYVIPWMGDKVVNTITALLIRCGFKANSFAGVI
EIDNSSVASVQHALKEMLLSGLPSAFDLATDVPEKYLDKYDEYLPESLLAKGYGAKAYET
EGTRIWLQKHL
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgagcagtgcctacgatagcctcgatccccgcgtccgtaagtgggtttacaagcagggg
tggtcgacattaaggcccttgcaggagagttctatcccggcaattttagcccgtgatcga
gacgtgctaatcagtgcaggtacagcagcgggtaaaacagaggctttctttcttcctgcc
tgttcggcagttgcagatctcacgaatggatttggcatcgtctatatcagtccgttgaag
gcattgattaacgatcagtaccgtcgtcttgggagccttggagatgcattggaaatgcca
gtgactccctggcacggggatgtaccacaaagcaaaaagaagaaggctcggacgaaccct
gctggcattttactgattacacctgagtcacttgagtctttgctcataaattcaatgggc
tggctcaaacaggcgttttcttcagtcgcatacatcgttattgatgagtttcatgctttt
attggttcagagcgtggtgtacagctgctttctctgctcaatagaattgaccatgtgcta
ggatgccaggtaaatccaattccccgcgttgcgttgagtgccacgctgggggaactggag
aaagtgcccgaaatgttgcgcccggacaaacgactcccctgcgtaactgttacagatagt
aatagcatggccactcttcaggtacaggtcaaagggtacctggagcgagtgatccaaaat
gaggaagaacttcagagttcagctgaacatgacgtttgcgctgacatttttagactttgc
cgtggcgattctcatttggtctttgcaaacagccgaaaacgcactgaaagcattgcggca
acgctgagcgacatgtgtgaggaacaaattgttccgaatgaatttttcccccaccatggt
tcccttgccaaggaattacgtgaggtgcttgaatctcgtcttcagaaaggaaatttgccc
acaacagctgtttgtacaatgacgcttgagttgggaattgatatcggtaaggttaaatcg
gttatccaagttacgcctccgcattctgtttccagtttgcgccagcgaatggggcgttct
gggcgacgcgattccccgtcagtactcagaatgctaattacagaaaatgagcttactgtg
agtagcagtatcgttgatcacctacgactccagttggtgcagtcgatggcaatgatcagg
ttgatgatctctaaacaatggtttgagcctgccgattcccggcagatgcattactccacg
ctgctacaccagattcttgcaattaccgcacaatggggtggagttcgtgccgaccagctc
tggtcacaactatgccagacagggccgttcagaaatgtagatttaaacgatttcaaaagc
ctgcttaaacatatgggagcatgtggcctactcactcaacttgctagcggcgaaatggtt
gttggggcagagggggagaaactgactaaccattacactttttatgccgtgttcaataca
ccagaagagttccgcattatcaccggaaacagaacccttggaacagtgcctgtggactcc
ccactgctaccagaccaacacatcatcttcggtgggcggcgctggaaagtgacagagatc
gagacagagaaaaaagttatctatgtagaggcaaccaaaggcggtcagccaccacaattt
agtgggggaggtatgtctgttcatgatgccgttcgtcaggaaatgctcgctatctatagg
gaaggtgattaccgcatagcaataggtagcaagaaagtagattatgccgatactgccgcc
agaaacctatttgcggaaggctgtagtaactttcagcgttttaaacttcaaaatgagtgt
tttattacgagtggacaacactgttacgtaataccctggatgggggataaagttgtcaat
acgattacagccttgctcatacgttgtggttttaaagcaaattcatttgctggcgttata
gaaatcgataactccagtgtagcttccgttcagcacgcgctgaaagaaatgctgttgtca
ggcttgccatctgcatttgatcttgccacagatgttccagaaaagtacttagataaatat
gacgagtatttaccagagtcccttcttgcgaaagggtatggtgcaaaggcgtatgaaaca
gaaggtacgcgcatctggttgcagaaacatctttag

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