KEGG   Kribbella qitaiheensis: F1D05_11260
Entry
F1D05_11260       CDS       T06749                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kqi  Kribbella qitaiheensis
Pathway
kqi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    F1D05_11260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kqi03400]
    F1D05_11260
Enzymes [BR:kqi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     F1D05_11260
DNA repair and recombination proteins [BR:kqi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     F1D05_11260
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: QNE18366
UniProt: A0A7G6WWK1
LinkDB
Position
2488459..2489385
AA seq 308 aa
MAAGQTQLTTEVDGQTMKLTNLGKVLYPQTGFTKAEVIDYYHQVASLLLPHLSDRPLTRK
RWPDGTGAAYFFEKNAPRGTPAWVRTVTLPTPGSSTGRDEADFVVADDVQTIVWLANLAA
LELHVPQWRIGLSDDGKTPTADLIVFDLDPGPGATIVECCDVALALRELLNHFGLEGWPK
TSGNKGMHLYVPIEPATSRSTSAFARQLAEQLAEALPENVTANMTKALRPGKVFIDWSQN
AGAKTTLAPYSLRGAEEPRVSTPIDWDEVAAATSVEELTFLPADVLARIEEYGDVLEGLY
DDPRPLPS
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcagccggacagacgcaactgaccaccgaggtcgacgggcagacgatgaagctcacc
aacctcggcaaggtgctctatccccagacggggttcaccaaggccgaggtgatcgactac
taccaccaggtggcctcgctgctgctgccacacctgtcggatcggccgctgacccgcaag
cgctggccggacggcaccggcgcggcgtacttcttcgagaagaacgctcctcggggtacg
ccggcctgggtccgcacggtgacgctgccgacccccggtagctctaccgggcgggacgag
gccgacttcgtcgtggcggacgacgtccagaccatcgtgtggctcgccaacctggccgcg
ctcgaactgcacgtcccgcagtggcggatcggactctccgatgacggcaagacgccgacc
gccgacctgatcgtgttcgacctcgacccgggtccgggagcgaccatcgtcgagtgctgc
gacgtggccctggcgctgcgcgaactgctgaaccatttcggcctcgaaggctggccgaaa
acctccggaaacaaggggatgcacctctacgtgccgatcgagccggcgacgtcccgcagt
accagcgcgttcgccaggcaactggccgagcagctggccgaggcgttgccggagaacgtg
accgcgaacatgacgaaggcgctccggcccggcaaggtgttcatcgactggagccagaac
gccggcgccaagaccacgctcgcgccgtactcgctgcgcggcgccgaggagccgcgggtc
tccacgccgatcgactgggacgaggtggccgcggcgacctcggtggaagaactcaccttc
ttgccggccgacgtgctggcccggatcgaggagtacggggacgtgctcgagggcctgtac
gacgacccgcgaccattgccgtcctga

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