Kribbella qitaiheensis: F1D05_36570
Help
Entry
F1D05_36570 CDS
T06749
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kqi
Kribbella qitaiheensis
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqi03019
]
F1D05_36570
Enzymes [BR:
kqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F1D05_36570
Messenger RNA biogenesis [BR:
kqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F1D05_36570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_22
RoxA-like_Cyt-c
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QNE22409
UniProt:
A0A7G6X844
LinkDB
All DBs
Position
7751360..7754080
Genome browser
AA seq
906 aa
AA seq
DB search
MLLPDPSAPGADLPVRAVLPATVDAVRSRGTAVLVAPPGSGKTSLLPLALADALDGTIIV
AEPRRMATRAAATRLAQLVGEPLGRQIGYAMRGERSGGKGLRVEVVTTGLLVRRLQQNPE
LPGVAAVVIDECHERHLDADLLLAFCVDVRANLREDLAIVATSATADTVRLSHALAADRP
APVVTASAAMFEVGIEWAPPPVPVPLLPGGRVDPRLLDHVAAVVQRAVGENDGDILVFVP
GEAEINGVTRRLAGLNGASASAGGAGFDVLPLFGRQSRAEQDRALAPGARRRIVVTTSVA
ESSLTVPGVRVVVDSGLAREPRTDQSRGLGALVTCRVSKSSADQRAGRAGREAPGRVYRC
WSATDHAHLDDHAAPEIATADLAAFALDLAAWGAPGGDGLALLEAPPAVAMTAATELLRR
LDAISDDGRITERGRRMAAVGAHPRLARALLDGTPWVGAERAREIVAMLSDDAGRDFGDD
LPARWRALRRGQDRAATARWREEAKRLSRGVEPPPVSGARAGVDESVSAAGAGVDEAVSA
AKAGVDEAVSAAAASARGAGSAGRALPGNRGGPESRLVGRIPDDLAAGIVVGLAYPDRIA
RARAVDSATYQMSGGTGAALDPQSPLRTTTWLAIAVADRAPGRADARIRSAAPIDEATAR
EVAGDLVSSSDQIRWDDGRVVTRRVEAFGAIVLNDAPLTKPDPLLVQAAVRDGLRRSGLS
VLRWSEAADSLRERLAFCHAHLGAPWPAVDDAALLASLDDWLGQELASVRRARDLERIDV
ASALRRLLPWPAATRFAELAPERLPVPSGSQVRLAYDGAEPPVLAVKLQEVFGWTTTPVV
ADGRVPVVLHLLSPARRPVAITSDLASFWVQGYPQVRADLRARYPRHPWPEDPLTAAPTK
RVKPRQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgctccttcccgatccgtccgcgccgggggcggacctgcctgtgcgcgccgtcttgccc
gcgaccgtcgacgcggttcgctcgcgcggtactgcggtgttggtcgcgccgcccggatcg
ggcaagacgtcgttgctgccactcgctctcgccgatgcgctcgacggcacgatcatcgtg
gccgagccgcggcggatggcgacgcgtgctgctgcgactcgattggcgcagttggtcggt
gagccgctgggacggcagatcgggtacgcgatgcgtggggagcgcagcggcggcaagggg
cttcgggtcgaggtggtgacgaccggccttctcgtacggcggttgcagcagaatccggaa
ctgcctggtgtcgcggccgtcgtgatcgacgaatgtcatgagcggcatctggatgctgat
ctgctgctcgcgttctgtgtcgatgtgcgggcgaatttgcgggaggatctcgcgatcgtg
gcgacgtcggctactgcggacacggtgaggttgagtcacgcgttggctgctgaccggccg
gcgcctgtggttactgcgtcggcggcgatgttcgaggtggggatcgagtgggcgccgccg
ccggttcccgtgccgttgcttcctggtgggcgcgtcgatccgcgattgctggatcacgtt
gcggcggtcgttcagcgggcggtgggggagaacgacggcgacatccttgtgttcgtgcct
ggggaggccgagatcaacggggtgacgcgtcggctggctgggctgaacggggcttcggct
tcggcgggtggtgcgggtttcgatgtgctgccgttgttcgggcggcagtcgcgggccgag
caggatcgtgcgctggcgccgggggccaggcggcgcatcgtggtgacgacgtctgtcgcg
gagagttcgctgacggtgccgggggtgcgggtggtggtggattcggggcttgctcgtgaa
ccgcggaccgatcagtcgcgcgggctcggtgcgttggtgacctgccgggtttcgaagtcg
tctgccgatcagcgggctggtcgtgctgggcgagaggcgccgggtcgcgtttatcggtgt
tggtctgcgacggatcacgcacatctcgacgatcatgcggcgccggagatcgctactgcg
gatcttgctgctttcgcgctcgatctggctgcgtggggtgcgcctggtggagacgggctg
gccttgctggaggcgccgccggcggtggcgatgacggccgcgaccgagttgctgcgtcgc
cttgatgccatctcggatgacggccggatcaccgagcgggggcggcggatggcggcagtc
ggcgcgcatccgcggctggctcgtgcgctgctcgacggtacgccgtgggtcggcgccgag
cgggcccgcgagatcgtcgcgatgctctccgacgatgccggccgcgacttcggcgatgac
ctgcccgcgcggtggcgagccctccgccgagggcaggaccgggcagccaccgcccgctgg
cgagaagaggcgaaacgcctcagccgtggcgttgagccgccaccggtgagcggggcgaga
gcgggtgtggatgagtcggtgagcgcggcgggagcgggtgtggatgaggcggtgagcgcg
gcgaaagcgggtgtggatgaggcggtgagcgcggcggcggcgagtgcgcgcggggcgggg
tcggcgggtcgcgcgctaccggggaaccggggtgggccggagtcgcggttggtcggccgg
attcctgatgatctggcggcggggattgtggtggggttggcgtatccggatcggattgcg
cgggctcgtgcggtcgactcggcgacgtaccagatgtcgggcgggaccggggctgcattg
gatccgcagtctccgttgcggactacgacctggttggcgattgcggttgccgatcgggca
cctgggcgcgctgacgcgaggatccggtctgccgcgcctatcgacgaggcgactgctcgg
gaggtggccggcgaccttgtctcgtcaagcgatcagatccgctgggacgacgggcgggtc
gtgacgcggcgggtggaggcgttcggggcgatcgttctcaacgacgcaccgctgaccaag
cccgacccgctgctcgtgcaagccgcagtacgcgatggcctgcgccgtagtggactctcc
gtactgcgctggtccgaggcggctgattcgctgcgcgagcggctcgcgttctgccatgcg
catcttggagccccgtggcccgcggtcgacgacgcggccttgctggcaagcctcgacgac
tggcttgggcaggagctcgcgtcggtgcgtagggcgcgcgatcttgagcgtattgacgtg
gcgtccgcgttgcggcggctgctgccgtggccggctgccacccggttcgctgagcttgcg
ccggaacggttgccggtgccgtctggttcgcaggtgcggctcgcgtacgacggggctgag
ccgccggtgctcgcggtgaagctgcaggaggtgttcgggtggaccacgacgccggtggtc
gcggacgggcgcgtgccggtcgtactgcatctgctctcgcccgcgagacgcccggtggcg
atcacgagcgatctcgcgtcgttctgggttcagggctatccgcaggtccgcgccgatctg
cgagcccgctacccacgccacccctggccggaggaccccctcacagccgccccgaccaaa
cgcgtcaaaccacgccagtag
DBGET
integrated database retrieval system
