Kosakonia radicincitans: A3780_17020
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Entry
A3780_17020 CDS
T04579
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00190
Oxidative phosphorylation
krd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
A3780_17020
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3780_17020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
krd03019
]
A3780_17020
Enzymes [BR:
krd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
A3780_17020
Messenger RNA biogenesis [BR:
krd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A3780_17020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
APG19180
LinkDB
All DBs
Position
3721615..3723675
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AA seq
686 aa
AA seq
DB search
MGQEKLYLEKELSWLCFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR
LIISEEQGTTTNSRHLLGKIQSRVLKADQEFDSLYNDLLLEMARNQIFLINERQLSQNQQ
SWLRNYFKQYLRQHITPTLINRETNLVRFLKDDYTYLAVEIIRGNDIRYALLEIPSDKVP
RFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYDSLNAYSMKMTRDAEYDLVHEME
SSLMELMSSSLKQRLTAEPVRFVYQRDMPDAMVAMLSEKLTISRYDSIIPGGRYHNFKDF
IGFPNVGKANLVNKPMPRLRHLWFDKFRNGFDAVRERDVLLYYPYHTFEHVLELLRQASF
DPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VQVIFSAPGLKIHAKLFLISRMEGEEVVRYAHIGTGNFNEKTARLYTDYSLITADARITN
EVRRVFNFIENPYRPVNFDYLLVSPQNSRRLLYDMIDAEIANAQNGQPSGITLKLNNLVD
KGLVDRLYTASSSGVPVNLLVRGMCSLIPELEGISENIRVISIVDRYLEHDRIYIFENGG
DKRVWLSSADWMTRNIDYRIEVAAPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRY
VPRGNRRKVRAQLAIYDYIKSLEQPD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaaagttatatctcgaaaaagaactaagctggttgtgcttcaacgaacgt
gttctccaggaagcggcagacaaaagtaacccgctaatcgagcgcatgcgttttttggga
atctattccaataacctcgatgaattttataaggtgcgttttgccgagctgaaacgccgg
ttgatcatcagcgaagagcaaggcaccactaccaactcacgtcatctgctgggcaaaatt
caatcccgcgtgctgaaggccgaccaggaattcgacagcctgtacaacgacctgctgctg
gagatggcacgcaaccaaatcttcctgatcaacgaacggcaactgtcgcaaaaccagcaa
agctggctgcgcaactacttcaagcagtatctgcgccagcacattacgccgacgttgata
aaccgtgaaaccaacctggtgcggttcttaaaagatgattacacctatctggcggtcgag
atcattcgcggcaacgatatccgttacgccctgctggagatcccgtcggacaaagtaccg
cgtttcgtgaatctgccgccggaaacgccacgtcgccgcaaaccgatgatcctgctggat
aacattctgcgctactgccttgatgacatctttaaaggcttcttcgattacgattcgctg
aatgcctactcgatgaagatgacccgtgatgccgaatacgatctggtgcacgagatggaa
tcgagcctgatggagctgatgtcgtcgagcctgaaacagcgtctgaccgccgaaccggta
cgctttgtttaccagcgcgatatgcccgacgcaatggtggcaatgctgagtgagaagctg
accatttcccgttatgactccattatccccggcgggcgttaccacaactttaaagacttt
attggcttcccgaatgtcggcaaagccaacctcgtcaacaaaccgatgccgcgtctgcgc
catctctggtttgacaaattccgcaacggtttcgatgccgttcgcgaacgcgatgtactg
ctctattacccctaccacaccttcgagcacgtgctggagctgctgcgccaggcgtctttc
gacccgagcgtgctggcgattaaaatcaatatctatcgcgtggcgaaagactcacgcatt
attgattcgatgatccatgcggcgcacaacggcaaaaaagtgaccgtggtggtggagttg
caggcgcgtttcgatgaagaagccaacatccactgggcgaaacggctgacggaagcgggc
gtgcaggtgatcttctcggcaccaggtttaaaaattcacgccaagctgttcctcatctcc
cgcatggaaggtgaagaagtggtgcgctacgcccatatcggtaccgggaactttaacgag
aaaacagcacgtctatataccgactactcgctgattacggccgatgcgcgcattaccaat
gaagtgcgccgggtgtttaactttattgagaacccgtatcgcccggtgaatttcgattac
ctgctggtgtcgccgcaaaactcgcgccgcctgctgtatgacatgatcgatgccgagatc
gccaacgcgcagaatggacagccttccggcattacgctgaagctgaacaacctggtggac
aaagggctggtggatcgcctctataccgcttccagctccggcgtgccggtgaatctgctg
gtgcgcggtatgtgttcgttgatcccggagcttgaaggcatcagcgaaaatattcgcgtg
attagcatcgttgaccgttatcttgagcacgatcgcatctatatttttgagaacggcggc
gataagcgagtctggctctcttccgctgactggatgacccgtaatattgattaccgtatc
gaagtggcggcaccgctgctcgatccacggcttaaacagcgcgttctggatatcattgac
attctgttcagtgatacggtaaaagcccggtacattgataaagaactgagcaatcgctac
gtgccgcgcggcaatcgtcgcaaagtacgcgcacagctggcgatttacgattacatcaaa
tcactcgagcagcccgattaa
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