Kosakonia radicincitans: A3780_19580
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Entry
A3780_19580 CDS
T04579
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00040
Pentose and glucuronate interconversions
krd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A3780_19580
Enzymes [BR:
krd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
A3780_19580
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
APG19654
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Position
4259187..4260362
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AA seq
391 aa
AA seq
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MAKGMRVKLNYAISRDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAKAEAIQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLREVNLQTLAEREVYRV
PDEWVGYGTWVANSDCSKLVGIEIAASDWTPLNDWKLFHDFFHKGPHCRLLRVDLKSGAS
SVIHEEKNWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKDHAEGESC
THEFWVPNGSALVYVSYLKGEQGRMIYRFNPDTGVNEAVMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYVFDVAQKGYFRVARHDTSWATFANSRQVTHPHPSFTP
DDSAILFSSDKDGKPALYIAKLPEQRTLLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggcatgcgggtaaaactcaattatgcaatcagccgcgatccggataccggc
gcggaagtcacccgcttaaccccaccggaagtgacctgtcaccggaattacttttatcaa
aagtgtttctttaatgatggcagccatctgctattcgccggtgaatttgacggacactgg
aactactacctgctggatatcgccaaagccgaagccattcagttaacggaaggcgcgggc
gacaacaccttcggtggttttctctctccggatgacagcgcgctctactatgtgaaaaac
gatcgcaccctgcgcgaagtgaatttgcagacgctggcagagcgtgaagtttatcgcgtg
ccggatgagtgggtcggttacggcacctgggttgccaatagcgattgcagcaaactggtg
gggatcgagattgccgccagcgactggacgccgctgaatgactggaaactgttccatgat
ttcttccacaaagggccgcactgccgcctgctgcgtgtagatctgaaaagcggcgcaagc
agcgtaatccatgaagagaaaaactggctcggacatcccatttaccgtccgttcgatgac
aataccgtcgcgttctgccatgaaggcccacacgatctggtggatgcgcggatgtggctg
gtgaatgaagacggcagcaacgtgcgcaaagtgaaagatcacgctgaaggcgaaagctgc
acgcacgaattctgggtgccgaacggttccgcgctggtgtatgtctcgtatctgaaggga
gaacagggccgtatgatttaccgtttcaacccggataccggcgtcaatgaagctgtaatg
cccatgcctgcctgctcgcatctgatgagtaatttcgacggcacgctgctggttggtgat
ggttccggtacgccggtagatgtgaaagataccagcggttacaccatcgataacgatcct
tatttgtacgttttcgacgtggcgcaaaaaggctatttccgcgtggcgcgacacgacacc
tcatgggcgacgtttgccaacagccgccaggtaacccatccacatccgtcgttcacaccg
gacgacagcgcgattttgtttagttcggataaagacggcaaaccggcgctctatatcgcg
aaacttccggaacaacgcaccttgttgcaagcatag
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