Kocuria rhizophila: KRH_14360
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Entry
KRH_14360 CDS
T00701
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
krh
Kocuria rhizophila
Pathway
krh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KRH_14360 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
krh03021
]
KRH_14360 (sigA)
Transcription machinery [BR:
krh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KRH_14360 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BAG29783
NITE:
KRH_14360
UniProt:
B2GJ78
LinkDB
All DBs
Position
complement(1619321..1621039)
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AA seq
572 aa
AA seq
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MSPAASKTASASQAPEAESASAQAAAQTGTSGAGTSAAAKKAPAKKTTAAKKTVARKSTA
AKKTTAARKTTAAGTAKTAGTKSTRSKTATATADATSEATTAPAAPSKAASDAPAESAPK
KTAARKTAAPKKTATRKTAASKTAASRTAGTKATSTTASSTSKTAEAESAEKPAAGTAKR
KPAAKAAPKTTGRGRKKADPVDEALAEDELAPEDVQEDTEDEDAQESAQASVEESAQLMK
GRQDRSARGFVLTNNDDDDAPAQQVVVAGATADPVKDYLKQIGKVALLNAEQEVDLALRI
EAGLYAEHKFADEADSMDANTRRAYRWVIHDGRRAKNHLLEANLRLVVSLAKRYTGRGML
FLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLARVQRQMLQDLGREPTPEELANELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFG
DLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccagctgccagcaagaccgcgtccgcctcccaggcccccgaggcagagtcggcc
tccgcccaggccgcagcccagaccggtacgagcggagcgggcacgagcgccgccgcgaag
aaggcgccagcgaagaagaccactgccgccaagaagacggtggcgcgcaagtccacggcg
gccaagaagaccacggccgcccggaagaccactgccgcgggcacggccaagaccgccggc
accaagtccacgagaagcaagacggcaacggccaccgctgacgcgacctcggaggccacc
accgccccggccgcaccgtcgaaggccgcgtcggacgccccggccgagtccgcccccaag
aagaccgcggcgcgcaagaccgcggctcccaagaagaccgcgacccgcaagacggccgcg
tcgaagaccgccgcgtcccgcactgcgggcaccaaggccacgagcaccacggcgtcctcc
acgtccaagaccgccgaggcggagagcgccgagaagcctgcggcgggcaccgccaagcga
aagcccgcggcgaaggctgcccccaagaccaccgggcgcggccgcaagaaggcggacccg
gtggacgaggcgctcgccgaggacgagctggcgcccgaggacgtccaggaggacaccgag
gacgaggacgcccaggagtccgcgcaggcctccgtcgaggagtccgcgcagctcatgaag
ggccgccaggaccgcagcgctcgcggcttcgtgctcaccaacaacgacgacgacgacgcc
cccgcccagcaggtggtcgtcgccggtgccaccgcggaccccgtcaaggactacctcaag
cagatcggcaaggtggcgctgctcaacgccgagcaggaggtggacctcgccctgcgcatc
gaggccgggctctacgccgagcacaagttcgcggatgaggccgactccatggacgcgaac
acccgccgggcctaccgctgggtgatccacgacggccgccgcgccaagaaccacctgctc
gaggccaacctgcgcctcgtggtgtccctggccaagcgttacacgggccgcggcatgctg
ttcctggacctgatccaggagggcaacctgggcctgatccgcgcggtcgagaagttcgac
tacaccaagggcttcaagttctccacgtacgccacgtggtggatccgccaggccatcacc
cgcgccatggcggaccaggcccgcaccatccgcatcccggtgcacatggtggaggtcatc
aacaagctggcccgcgtgcagcgccagatgctgcaggacctcggccgcgagcccaccccg
gaggagctcgccaacgagctcgacatgacccccgagaaggtggtggaggtacagaagtac
ggtcgcgagcccatctcgctgcacaccccgctgggcgaggacggcgattccgagttcggg
gacctgatcgaggactccgaggccgtggtccccgcggacgcggtgtccttcacccttctg
caggagcagctgcactccgtgctggacaccctgtccgaacgggaggccggcgtggtggcc
atgcgcttcggactcaccgacggccagcccaagaccctggacgagatcggcaaggtctac
ggggtgacccgcgagcggatccgccagatagagtccaagaccatgtccaagctgcgccac
ccgtcccgctcgcaggtgctgcgggactacctcgactga
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