Kocuria rhizophila: KRH_18360
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Entry
KRH_18360 CDS
T00701
Symbol
rnhA
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
krh
Kocuria rhizophila
Pathway
krh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRH_18360 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_18360 (rnhA)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
KRH_18360 (rnhA)
DNA replication proteins [BR:
krh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
KRH_18360 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
KRH_18360 (rnhA)
Elongation factors (archaeal)
KRH_18360 (rnhA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
Motif
Other DBs
NCBI-ProteinID:
BAG30183
NITE:
KRH_18360
UniProt:
B2GFP5
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All DBs
Position
complement(2087977..2089092)
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AA seq
371 aa
AA seq
DB search
MTIIASADGSALGNPGPAGWAWYIDPTSWRAGGWAHGTNNMGELTAVLDLLEATRHRRDE
ALTVYCDSQYVINSVTKWMPGWKKKGWKKRDGKPVLNVDIMKALDRELSGRKVTFEWVKG
HAGHELNEAADERARAMAMAYQRKIPPAQMPVGPGFRDEASSSPAASPSAGKQGEQQGPG
AGPGAVRGTADHEATPAPDAPGNEPGRENARSDRNRAEVDDAAPHDLLTELAALSATDPA
GPAAPESQPWPPHLVADAVQRERAVVCVPADHQGAAVGSAQVSGGELLHPRVLCIDRSGN
TAGAADFPGVRSAGELEEVRITAVAADVYHLSYRIEEPSVVTRRSSVWVREDQHNEMGPW
LLRFHQVTAED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcatcgcttccgcggacggctccgcgctcggcaaccccggaccggcaggctgg
gcctggtacatcgaccccacctcgtggcgggccggaggatgggcgcacggcaccaacaac
atgggcgagctcacggccgtgctggacctgctggaggccacgcgccaccgccgggacgaa
gcgctcacggtgtactgcgacagccagtacgtgatcaactcggtgaccaagtggatgccg
gggtggaagaagaagggctggaagaagcgcgacggcaagcccgtgctcaacgtggacatc
atgaaggccctggaccgtgagctgtccgggcggaaggtcacgttcgagtgggtcaagggc
catgctggccacgagctcaacgaggccgcggacgaacgggcccgggccatggccatggcg
taccagcgcaagatcccgcccgcgcagatgcctgtggggccgggattccgggacgaggcg
tcctccagtccggcggcgtccccctcggccgggaagcagggcgaacagcaggggcccggc
gctggtcccggagccgtcaggggcaccgctgaccacgaggccacccccgccccggatgct
cccgggaacgagcccggtcgggagaacgcccgatcggaccgcaaccgcgcggaggtggac
gacgccgccccgcacgacctcctcaccgaactcgccgctctgtctgcaaccgatccggcg
ggcccggcggccccggagtcgcagccctggccgccccacctcgtggcggacgccgtccag
cgcgaacgcgctgtggtgtgcgtgcccgcggaccaccagggggcggccgtgggctccgcg
caggtctccggcggggagctgctgcacccccgggtgctgtgcatcgaccgttccggtaac
actgcgggtgccgccgacttcccgggggtgcgctccgccggcgagctggaggaggtgcgc
atcaccgcggtggccgcggacgtataccacctgagctaccggatcgaggagccctccgtg
gtgacccgccgcagctccgtgtgggtccgcgaggaccagcacaacgagatgggcccctgg
ctgctgcgcttccaccaggtcaccgcggaggactga
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