KEGG   PATHWAY: kva00630
Entry
kva00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Klebsiella variicola At-22
Class
Metabolism; Carbohydrate metabolism
Pathway map
kva00630  Glyoxylate and dicarboxylate metabolism
kva00630

Module
kva_M00012  Glyoxylate cycle [PATH:kva00630]
kva_M00621  Glycine cleavage system [PATH:kva00630]
Other DBs
GO: 0046487 0043648
Organism
Klebsiella variicola At-22 [GN:kva]
Gene
Kvar_4850  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Kvar_4769  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Kvar_4851  malate synthase A [KO:K01638] [EC:2.3.3.9]
Kvar_0455  malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
Kvar_3644  citrate synthase I [KO:K01647] [EC:2.3.3.1]
Kvar_3891  citrate synthase I [KO:K01647] [EC:2.3.3.1]
Kvar_4365  aconitate hydratase domain protein [KO:K01681] [EC:4.2.1.3]
Kvar_3041  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Kvar_4258  aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Kvar_0802  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Kvar_2219  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Kvar_2870  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Kvar_3078  Catalase [KO:K03781] [EC:1.11.1.6]
Kvar_1089  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Kvar_3325  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Kvar_0188  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Kvar_0345  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Kvar_5045  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Kvar_1187  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Kvar_0729  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Kvar_0727  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Kvar_4124  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Kvar_4262  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Kvar_0728  glycine cleavage system H protein [KO:K02437]
Kvar_1114  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Kvar_3230  Xylose isomerase domain protein TIM barrel [KO:K01816] [EC:5.3.1.22]
Kvar_0560  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
Kvar_0561  glycerate kinase [KO:K00865] [EC:2.7.1.165]
Kvar_0926  glycerate kinase [KO:K00865] [EC:2.7.1.165]
Kvar_3058  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Kvar_2858  Glycolaldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
Kvar_0903  lactaldehyde reductase [KO:K00048] [EC:1.1.1.77]
Kvar_0459  hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit [KO:K03779] [EC:4.2.1.32]
Kvar_0460  hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit [KO:K03780] [EC:4.2.1.32]
Kvar_3059  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Kvar_3364  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Kvar_1744  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Kvar_5032  molybdopterin oxidoreductase Fe4S4 region [KO:K00123] [EC:1.17.1.9]
Kvar_5033  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Kvar_5034  formate dehydrogenase, beta subunit [KO:K00124]
Kvar_5035  formate dehydrogenase, gamma subunit [KO:K00127]
Kvar_1975  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
kva00010  Glycolysis / Gluconeogenesis
kva00020  Citrate cycle (TCA cycle)
kva00030  Pentose phosphate pathway
kva00053  Ascorbate and aldarate metabolism
kva00071  Fatty acid degradation
kva00230  Purine metabolism
kva00250  Alanine, aspartate and glutamate metabolism
kva00260  Glycine, serine and threonine metabolism
kva00620  Pyruvate metabolism
kva00710  Carbon fixation by Calvin cycle
kva00750  Vitamin B6 metabolism
kva00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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