Klebsiella variicola At-22: Kvar_3577
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Entry
Kvar_3577 CDS
T01170
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
kva
Klebsiella variicola At-22
Pathway
kva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Kvar_3577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kva03400
]
Kvar_3577
DNA repair and recombination proteins [BR:
kva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Kvar_3577
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Kvar_3577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
DUF3848
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ADC59457
LinkDB
All DBs
Position
complement(3746714..3748735)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESTVPR
YTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG
QGLAKTKAKGRGKAKAVEPAGLSAVEMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcgtttgttctgcattccgcctttcgcccctccggagaccaaccggaagcc
atccgccgcctggaagaggggctggaggatgggctcgcgcatcaaacgctgctgggggtc
accggctccggtaaaaccttcaccatcgccaacgtgattgccgacctgcagcggccgacg
atggtgctggcgccaaacaaaaccctggcggcccagctctacggcgagatgaaagagttt
ttcccggagaatgccgtcgagtatttcgtctcctactacgattactatcagccggaagcc
tacgtccccagctcagataccttcattgagaaggacgcctcggtaaacgaacatatcgag
cagatgcgcttgtcggcgaccaaagcgctgctcgagcggcgcgacgtggtggtggtggcg
tcagtctcggctatctacggcctcggcgacccggacctgtacctgaagatgatgctgcac
ctgacggtcgggatgctgattgaccagcgcgctatcctgcgccgtctggccgaactgcag
tatacccgcaacgatcaggccttccagcgcggcacctttcgcgtgcgcggcgaggtgatc
gacgtcttcccggcggaatccgacgatatcgcgctgcgcattgagctgtttgatgaagag
gtcgagcgcctgtcgctgttcgacccgctcaccggccacgtggaatcgacggtgccgcgc
tacaccatttatcccaagacccactacgtgacgccgcgggaacgcatcgtccaggcgatg
gaagagatcaagctggagctggcggagcggcgcaaggttctgctggccaacaacaagctt
ctggaagagcagcgcttaacccagcgtacccagttcgacctcgaaatgatgaacgaactg
ggctactgctcgggcattgaaaactactcgcgcttcctttccggtcgcgggcccggcgag
ccgccgcccactctgtttgactatctgccggcagacggtctgctggtgatagacgaatcc
cacgttacggtgccgcagatcggcggtatgtaccggggcgaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctgccgtcggcgctggataaccggccgatgaagtttgaa
gaatttgaagcgctggccccgcaaaccatctacgtctcggcaacccccggcgcctacgag
ctggataaatccggcggcgaagtggtggatcaggtggtgcggccgaccggtctgcttgac
ccgatcatcgaagtgcggccggtagccacccaggtagacgatctgttgtcagagatccgc
ctgcgcacggccatcaacgagcgcgtgctggtgaccaccctcactaagcggatggcggag
gatttaaccgagtatcttgaggagcacggcgagcgggtgcgctatctgcactcggatatc
gacaccgtcgagcgcatggagattatccgcgacctgcgccttggcgagtttgacgtgctg
gtagggatcaacctgctgcgtgaggggctggatatgccggaggtgtcgctggtggcgatc
ctggatgccgataaagagggcttcctgcgctccgaacgctcgcttatccagaccatcggc
cgcgcggcgcgaaacatcaacggcaaggccatcctttacggcgataagatcaccccttcc
atggccaaagccattggcgagaccgagcgtcgacgggagaaacagcagcgttataacgaa
gagcacggcatcgtaccgcagggcctcaacaagaaagtggtggatatcctgcagttgggc
cagggcctggcgaaaactaaagccaaagggcgcggtaaagcgaaggccgttgagcctgcc
gggcttagcgccgtggagatgacgccaaaagcgctgcagcagaagatccacgagctggaa
gggcagatgatgcagcacgcccagaacctcgagttcgaagaggcggcgcaaattcgcgac
cagttgcatcagctgcgcgagctgtttatcgcggcctcctga
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integrated database retrieval system
