Klebsiella variicola DX120E: KR75_15960
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Entry
KR75_15960 CDS
T03531
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kvd
Klebsiella variicola DX120E
Pathway
kvd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR75_15960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvd03400
]
KR75_15960
DNA repair and recombination proteins [BR:
kvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR75_15960
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KR75_15960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
DUF3848
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AJA96288
UniProt:
A0A288TPJ9
LinkDB
All DBs
Position
complement(3824186..3826207)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESTVPR
YTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG
QGLAKTKAKGRGKAKAVEPAGLSAVEMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcgtttgttctgcattccgcctttcgcccctccggagaccaaccggaagcc
atccgccgcctggaagaggggctggaggatgggctcgcgcatcaaacgctgctgggggtc
accggctccggtaaaaccttcaccatcgccaacgtaattgccgacctgcagcggccgacg
atggtgctggcgccaaacaaaaccctggcggcccagctctacggcgagatgaaagagttt
ttcccggagaatgccgtcgagtatttcgtctcctactacgattactatcagccggaagcc
tacgtccccagctcagataccttcattgagaaggacgcctcggtaaacgaacatatcgag
cagatgcgcttgtcggcgaccaaagcgctgctcgagcggcgcgacgtggtggtggtggcg
tcagtctcggctatctacggcctcggcgacccggacctgtacctgaagatgatgctgcac
ctgacggtcgggatgctgattgaccagcgcgctatcctgcgccgtctggccgaactgcag
tatacccgcaacgatcaggccttccagcgcggcacctttcgcgtgcgcggcgaggtgatc
gacgtcttcccggcggaatccgacgatatcgcgctgcgcattgagctgtttgatgaagag
gtcgagcgcctgtcgctgttcgacccgctcaccggccacgtggaatcgacggtgccgcgc
tacaccatttatcccaagacccactacgtgacgccgcgggaacgcatcgtccaggcgatg
gaagagatcaagctggagctggcggagcggcgcaaggttctgctggccaacaacaagctt
ctggaagagcagcgcttaacccagcgtacccagttcgacctcgaaatgatgaacgaactg
ggctactgctcgggcattgaaaactactcgcgcttcctttccggtcgcgggcccggcgag
ccgccgcccactctgtttgactatctgccggcagacggtctgctggtgatagacgaatcc
cacgttacggtgccgcagatcggcggtatgtaccggggcgaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctaccgtcggcgctggataaccggccgatgaagtttgaa
gaatttgaagcgctggccccgcaaaccatctacgtctcggcaacccccggcgcctacgag
ctggataaatccggcggcgaagtggtggatcaggtggtgcggccgaccggtctgcttgac
ccgatcatcgaagtgcggccggtagccacccaggtagacgatctgttgtcagagatccgc
ctgcgcacggccatcaacgagcgcgtgctggtgaccaccctcactaagcggatggcggag
gatttaaccgagtatcttgaggagcacggcgagcgggtgcgctatctgcactcggatatc
gacaccgtcgagcgcatggagattatccgcgacctgcgccttggcgagtttgacgtgctg
gtagggatcaacctgctgcgtgaggggctggatatgccggaggtgtcgctggtggcgatc
ctggatgccgataaagagggcttcctgcgctccgaacgctcgcttatccagaccatcggc
cgcgcggcgcgaaacatcaacggcaaggccatcctttacggcgataagatcaccccttcc
atggccaaagccattggcgagaccgagcgtcgacgggagaaacagcagcgttataacgaa
gagcatggcatcgtaccgcagggcctcaacaagaaagtggtggatatcctgcagttgggc
cagggcctggcgaaaactaaagccaaagggcgcggtaaagcgaaggccgttgagcctgcc
gggcttagcgccgtggagatgacgccaaaagcgctgcagcagaagatccacgagctggaa
gggcagatgatgcagcacgcccagaacctcgagttcgaagaggcggcgcaaattcgcgac
cagttgcatcagctgcgcgagctgtttatcgccgcctcctga
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