Lysobacter antibioticus 76: LA76x_0524
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Entry
LA76x_0524 CDS
T04154
Name
(GenBank) fimbrial isopeptide formation D2 domain protein
Organism
lab
Lysobacter antibioticus 76
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA_2
DUF11
Emfourin
OmpA
bMG10
GramPos_pilinBB
Motif
Other DBs
NCBI-ProteinID:
ALN78685
UniProt:
A0A0S2F5F7
LinkDB
All DBs
Position
634009..639249
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AA seq
1746 aa
AA seq
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MAPNITGLVKTLALVNDVAYVTGQPIKAGDKLTYRLTFRNEGNDAGTVYANNVDETLPPN
TVAEPMPPDVPDSYLPNRQHFDCSAAPGAPCRNWRALTVPAHDTGSMDFIVRVDSLPVNT
NEIVNNVAATIGRLPNGTGGTPIDCTPGSGNDCTEVTPIIKVVKTLLTGGPTAAAGETLV
YQIQLTNGGTTSATIPVGGITETVPTATTAAAGDSFGCAAGAAAGTSCTNTAAVTVAANG
GTVNLTFRVTVDSPLPAGTQNILNTVALPQFVDCASQDNDCAETTPTSRATLTLVKTVTN
DNGGTATVGNFPLTAAGPTPITGVSGTTTVTNASVAPGVYALSETTMAGYTAGAWSCTGG
SLSGSNLTLADGDTATCTINNNDQAATLTLVKTVTNDNGGTAVATAWTLQANGPTSISGA
TGATAVTNASVSAGNYNLSETGGPSGYTAGTYSCVVNGGAALVSNSLTLAVGDAATCTIN
NNDQAATLTLVKTVINNNGGTATINNFPLTAAGPTPINGVSGTATVTNAPVSAGVYALSE
ANVTGYTAGPWSCVGGTLSGSSLTLASGVSATCTIVNDDVPPPTQTIVKAVTANADQDST
GTVTLGDTLTYTITVTNTSTTTNLDNVVISDSKITPTGGTTPCASVTPGGICTLIGTYTV
VAADVTTGNIVNTASSTSSICPPGSTDSTCTTTLTTPVSSLSQGLAKTVTANADEDGSGT
VSVGDTLTYAVTMTNTSTTSTLSNVVVSDNKITPSSITCATVAPGTTCVLSGSYVVTATD
ASAGSIINTATVTSPVCPTGSTDPGCTTTVTTPVPPRSQTLAKALTGNADEDGSGTVSVG
DTLTYTVTMTNTSASGNLTNVVVSDNKITPSSTTCASVASGATCVLSGTYLVTADDATAG
NIVNTATSTSPICLPGSTDPACTTTVTTPVASLSQTLVKALTGNADEDRSGTVSLGDTLT
YTVTVTNTSTGGNLTNVVVNDNKITPNSITCATMAPGATCVLTGTYVVTAADVTAGNIVN
TATSTSPVCAVGSTAASCTATVNTPVIPASVRYAKAANTAGPVLVGDTITYTLTTTISGG
KTLGVTTLTDTLGTGLDFTAVTNAAGYSCNAANPLVCTLPAGTVPGTYTVTYTAKVNEQA
SETVNNTVLGTGTDNPTCQGNCATSTPVTLTQSLRVIKQASPRDVKIGDLVRYTVTVENT
GTRDTIDATLVDTPPAGFTFVDGSLSVADRDGVGRLVGTYPIQVDQVDIAAGERATFTYL
LRVGAGVRAGIHSNSALMRDNGKIVSNVATAEVQLIADPLLDHALILGTVFDDRDGDGWQ
DSAAIDDARVQGGFAADAYVPNSTTVDRGTGPKAEPDASSPMLHGIVLGSISARQSDADP
VDAHRVVISQRLKELSFTDDFALTTKQGVTVRMDAAGTTRIERSGDAAKNLSGAAPTVER
RVSPTEGGYVVDYIVRNTGVDERGIPGVRIASIEGLLMETDQYGRYHLEGVDVGTLERGR
NFILKVDPSTLPPGSVFTTDNPLTRRVTPGLPVRFDWGVKLPAGLIEGGEEQIEMELGEV
FFAPGSAEVRAQYLPAIEKMAAQIKQHRGGEVVISANGDSESLAFDRASAVKAELVKQLP
ADVLQALKVSVRGNADDPGSLIVGLGEGGALLGTVLFDTDKSSIKPEFEPLLDKVAAALE
RMHGGVIAIVGHTDVRASYQYNTALGMRRAKAVYDALAQRLSPEVRAKVRVESSNDPTAP
VDVKRN
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccgaatatcaccggactggtgaagacgctcgccctggtcaatgacgtggcctat
gtgactggccagccgatcaaggccggggacaagctgacctaccggctgaccttccgcaac
gagggcaacgatgcgggcaccgtctatgccaataacgtggatgaaacccttccgccgaat
acggtggccgaacccatgccgcccgacgttccggacagctatctgccgaatcggcagcat
ttcgactgctcggctgcgccgggtgcgccttgccgcaattggcgtgcgcttaccgttcca
gcgcacgatacggggtctatggatttcatcgttcgggtcgattcgctgccagtcaacacc
aatgagatagtcaataatgtggcggctaccatcggcaggttgccgaacggtaccggcggt
acgcctatcgattgcaccccgggcagtggcaacgactgcaccgaagttacgccgatcatc
aaagtcgtgaagacgctgctgaccggcggcccgacggctgccgccggcgaaactctcgtc
tatcagattcaactgactaacggcggtacgacctcggccaccattccggtcggcggcatc
accgagaccgtaccgacggcgaccaccgcggcagcgggcgacagctttggctgcgccgcc
ggtgcggcggcgggtacgagttgcaccaacacggctgcagtgaccgtggcggcgaacggc
ggtacggtcaacttgaccttccgggtgaccgtggacagcccgctccccgcgggtacccag
aacatcctcaatacggtcgctcttccgcagttcgtcgattgcgcatcgcaagacaatgac
tgcgcggagaccactccgacgtcccgcgcgacgctgaccctggtcaagacggtgaccaac
gacaacggcggcaccgccacggtcggcaacttcccgttgaccgcggccggtccgaccccg
atcaccggcgtcagtggcaccacgacggtgaccaacgcgtcggtcgccccgggcgtgtat
gccttgagcgagacgacgatggccggttacaccgctggcgcctggagctgcaccggtggc
tcgttgtcgggtagtaatctgaccttggccgatggcgataccgcgacctgcacgatcaac
aataacgaccaggccgcgaccctgaccctggtcaagacggtgaccaacgacaacggcggt
accgcggttgctacggcctggacgctgcaagcgaacggcccgaccagcatcagcggagcc
accggcgccacggctgtcaccaatgcctcggtcagcgcgggtaactacaacctctccgaa
accggcggcccgagcggctataccgccggcacctacagttgtgtcgtcaatggcggcgcc
gcgctggtttccaacagcctgacgctcgccgtcggcgatgccgcgacctgcacgatcaac
aataacgaccaggccgcgaccttgaccttggtcaagacggtgatcaacaacaacggcggc
accgcgacgatcaacaacttcccgttgaccgcggccggtccgacccctatcaacggcgtc
agcggtactgcgacggtgaccaacgcgccggtctcggccggcgtgtacgccctgagcgaa
gccaacgtcaccggttataccgccggcccgtggagctgcgtcggcggcaccctgtcgggt
agcagcctgaccctggccagtggtgtttcggcgacctgcaccatcgtcaacgacgacgtg
cctccgccgacgcagacgatcgtcaaggcggtgaccgccaatgccgaccaagacagcacc
ggcacggtgaccttgggcgacacgctgacctacacgatcacggtgaccaacaccagcacg
accacgaatctcgacaatgtggtcatcagcgactccaagatcacgcccacgggcggcacg
acgccgtgcgcgagcgtgacgccgggcggcatctgcaccctgatcggcacctatacggtg
gtcgcagcggacgtgaccacgggcaacatcgtcaacaccgcgagctcgaccagttcgatc
tgcccgccgggcagtaccgattcgacctgcaccacgacgctgaccacgccggtctcgtcg
ctgagccagggcctggccaagacggtgaccgcgaatgccgacgaggacggctcgggcacg
gtgtcggtgggcgacacgctgacctatgcggtcacgatgaccaataccagcaccacctcg
accctgagcaacgtggtggtgagcgacaacaagatcaccccgagcagcatcacctgcgcc
accgtggcgccgggtacgacctgcgtgctgagcggcagctacgtggtgacggcgaccgac
gcgagcgcgggttcgatcatcaacaccgcgaccgtgaccagcccggtctgcccgaccggc
agcaccgatcccggctgcaccacgacggtgaccacgccggtgccgccgcgtagccagacc
ctggccaaggcgctgaccggcaatgccgacgaagacggttcgggcacggtatcggtgggc
gacacgctgacctatacggtgacgatgaccaacaccagtgcgagcggcaacctgaccaac
gtggtggtgagcgacaacaagatcaccccgagcagcacgacctgcgcttccgtggcgtcg
ggtgcgacctgcgtgctgagcggcacttacttggtgacggcggacgatgcgaccgcgggc
aatatcgtcaacaccgcaacctcgaccagcccgatctgcctgccgggcagcaccgacccg
gcctgcaccaccacggtgaccaccccggtggcgtcgctgagccagaccctggtcaaggcg
ctgaccggcaatgccgacgaggaccgctcgggcacggtgtcgctgggcgacacgttgacc
tacacggtgacggtgaccaacaccagcaccggcggcaacctgaccaacgtggtggtgaac
gacaacaagatcaccccgaacagcattacctgcgccaccatggcgccgggcgcgacctgc
gtgctgaccggcacctatgtggtgacggcggccgacgtgaccgccggcaacatcgtcaac
accgcgacctcgaccagcccggtctgtgcggtgggcagcaccgctgcatcctgcacggcc
acggtcaacaccccggtgattcccgcctcggtgcgttacgcgaaggcggcgaacaccgcc
ggtccggtgctcgtgggcgacacgatcacttacaccctgaccaccacgatcagcggcggc
aagaccctgggcgtgaccacgctgaccgacaccctcggcaccggcctggacttcaccgcg
gtgaccaatgcggccggctacagctgcaatgcggccaacccgctggtgtgcaccttgccg
gccggtacggtgccgggtacctacacggtgacctacaccgcgaaggtcaacgaacaggcg
tcggagacggtgaacaacaccgtgctcggcaccggtacggacaacccgacttgccagggc
aactgcgccaccagcacgccggtgactctgacgcagagcctgcgggtgatcaagcaggcc
tcgccgcgcgatgtgaagatcggcgacctggtccgctacacggtcacggtcgagaacacc
ggtacccgcgacacgatcgacgcgaccctggtcgacacgccgcctgcgggcttcaccttc
gtcgacggttcgctgtcggtcgcagatcgcgacggcgtcggtcgcctggtcggtacctat
ccgatccaggtcgaccaggtcgacatcgccgccggtgagcgcgcgacgttcacctacctg
ctgcgggtcggcgccggcgtgcgcgcgggcatccactccaacagcgcgctgatgcgcgac
aacggcaagatcgtctctaacgtggccaccgccgaagtgcagctgatcgccgatccgttg
ctcgaccacgccctgatcctgggcacggtgttcgacgaccgcgacggcgacggttggcag
gacagcgcggcgatcgacgatgcgcgggtccagggcggcttcgctgccgacgcttacgtg
ccgaactcgaccacggtcgatcgcggcaccggtccgaaggcggaaccggacgcgagctcg
ccgatgctgcacggcatcgtgttgggcagcatctcggcccgtcagtccgacgccgatccg
gtcgacgcgcaccgcgtggtgatcagccagcgcctgaaggagttgagcttcaccgacgac
ttcgcgctgaccaccaagcagggcgtgacggtgcggatggatgcggccggtaccacccgg
atcgagcgcagcggcgacgcggccaagaacctcagtggcgcggccccgacggtggaacgt
cgggtcagcccgaccgaaggcggctacgtggtcgactacatcgttcgcaacaccggtgtc
gacgaacgcggtatcccgggcgtgcgcatcgcctcgatcgagggcttgttgatggagacc
gaccagtacggccgctatcacctcgagggcgtggacgtgggcaccctggaacgcggccgc
aacttcatcctcaaggtcgatccgtcgaccctgccgccgggcagtgtgttcaccaccgac
aacccgctgacgcgccgcgtcaccccgggcctgccggtccgcttcgactggggcgtcaag
ctgccggccgggctgatcgaaggcggtgaggagcagatcgagatggaactgggcgaagtg
ttcttcgccccgggcagcgccgaggtgcgtgcgcagtacctgccggcgatcgagaagatg
gccgcgcagatcaagcaacaccgcggcggcgaagtggtgatcagcgccaacggcgatagc
gagtcgctggcgttcgatcgggcttcggcggtcaaggccgagttggtcaagcaattgccg
gccgacgtgctgcaggcgctgaaggtcagcgtgcgcggcaacgccgacgacccgggttcg
ctgatcgtcggtctgggcgaaggcggtgcgctgctgggcacggtgttgttcgacaccgat
aagtcgagcatcaagccggagttcgagccgttgctggataaggtcgctgctgcgctggag
cgcatgcacggcggcgtcatcgcgatcgtcggccacaccgatgtgcgcgcttcgtaccaa
tacaacactgcgctcggtatgcgacgcgccaaggccgtctacgacgcgttggcccagcga
ctgagccccgaagtgcgcgccaaggtgcgagtcgagtcgagcaacgatccgaccgcccct
gtcgacgtgaagcggaattga
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