Lysobacter antibioticus 76: LA76x_2025
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Entry
LA76x_2025 CDS
T04154
Name
(GenBank) sigma-54 interaction domain protein
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lab
Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lab03110
]
LA76x_2025
Chaperones and folding catalysts [BR:
lab03110
]
Heat shock proteins
HSP100
LA76x_2025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
PCRF
AAA_16
AAA_18
nSTAND3
T2SSE
AAA_30
Zeta_toxin
AAA_7
AAA_29
IstB_IS21
TsaE
AAA_28
Sigma54_activat
HerA_C
TIP49
DUF815
AAA_23
AAA_24
ATPase_2
NTPase_1
RsgA_GTPase
NB-ARC
Mg_chelatase
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
ALN80168
UniProt:
A0A0S2F9D2
LinkDB
All DBs
Position
complement(2271503..2274853)
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AA seq
1116 aa
AA seq
DB search
MEALLLVVGLIAGLILARLYRPQAAVVAAVADAPRTDAENAPAVEQIQNEAEAPIESTSE
TAEAPEDRLLRLVRSIDALDERIQRPQDLLALPEFHQGVDLVASEAFSAADLVGQLSGTG
YVLQSMITKALPRRSDVALDPVFEHVGQFGGYPLHFLIEYLRTRPDAGDVPKLLRHAQPW
WWDFAPVRQQLRDYLQWAEQFGAAPAAPVLDELEEHAATQLRDTLKRFQSPLLEPLIEQA
EHATNARRESRVLGAFGRVNASAKAQTRIVHDALARQLERLHELLSGDDAASVLVSGEHG
VGKTVLIDLLAERLQAEGWLVFEASAAEILSGQSYIGELEERVREMLGVLNRKRAVWRAP
EFFDLLAKGSHSRDPRGLLDLVLPAIERGQLRVIGEITPRQLAQLLIARPVIKHHVEIVQ
LLPTETDALEAIAAEWARLEGERLGRPVADARALAEGARMAAQYFPEQQEPGRLLRLLND
ALQSALAETSPALPLDPERLLATIAQRSGLPLDVIDDRQSLDLDRLRAFFRQRVIGQDEA
VDALLDRIAMLKAGLIDSGRPIGVFLFAGPTGTGKTELAKALGELLFGSDERLLRLDMSE
FQSEDSAWRLTADEGGQSGVRSLTSRIREQPFSVVLLDEFEKAHPKVWDLFLQVFDDARL
SDRSGHTADFRHSIIILTSNVGSTISRSAGPGFTSARGGYSRDAVEKALFETFRREFLNR
LDRIVLFNPLDRSLMREILHKELKRVLTRRGLRNRDWAVEWEPSAIEFLLDRGFTPDLGA
RPLRRAIEHYLLAPLARSIVEHRAPQGDQFLFVRSAGDQLEVQFIDPDASRRNDGAAAEV
VAPADAGDLRDLVHAPSAAAAAVARLDARLQQLDQTVSAQDWVSAREADYARMAEADFWN
AGDRHPVLDRIERRDRIESALDTAQRMRQRLREDGGNDEFAGRIAQLLFLLGLAVDAVRE
QRPQDALIEIDTDEAAHLRHGPDLRLWWQRLLAMYLAWAQRRNMRVEVLRQDAERCKAWL
AVSGFGAFDLLQAESGLHVLEDQEDGVTRRVSLSVQVAPDLPGRARVAQAAAEGERRISR
RYRESPSPLVRDGVRGWRSGRLDRVLGGEFDVMQGG
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtggaagccttattactcgtcgtcggcctgatcgccggcctgattctcgcgcgtctttat
cgaccgcaggcggcagtcgtcgctgcggtggcggatgcgccgcggacagatgcggaaaac
gcaccggccgtcgagcaaatccaaaacgaagccgaagcaccgattgaatcgacttcggaa
acggccgaagcaccagaggatcgattacttcggttggtccgttccatcgatgcgctcgac
gaacgcatccagcgcccgcaagacctgcttgccctgcccgagttccaccagggcgtcgat
ctggtcgcgagcgaagcctttagcgccgccgacctggtgggccagctcagcggcaccggc
tacgtgctgcaatcgatgatcaccaaggccctgccgcgacgcagcgacgtcgcgctcgac
ccggtgttcgaacacgtcggccagttcggcggctatccgctgcacttcctgatcgagtac
ctgcgcacccgtcccgacgccggcgacgtgcccaagctgctgcgccatgcccagccgtgg
tggtgggacttcgccccggtgcgccagcaactgcgcgactacctgcaatgggccgaacaa
ttcggcgcggcgccggccgcgccggtgctggacgaactcgaggaacacgcggccacgcag
ttgcgcgacaccctcaagcggttccagtcgccgctgctggaaccgctgatcgagcaggcc
gaacacgccaccaatgcgcgccgcgaaagccgcgtgctcggcgccttcggccgggtcaac
gccagcgccaaggcgcagacgcgcatcgtgcacgacgccctcgcccgccagctcgaacgc
ctgcatgagctgctatcgggcgacgatgccgcctcggtgctggtctccggcgaacacggc
gtcggcaagaccgtgctgatcgacctgctggccgagcgtctgcaagccgagggctggctg
gtgttcgaggcctccgcggccgagatcctgtccggccagagctacatcggcgaactcgaa
gagcgggtgcgcgagatgctcggcgtgctcaaccgcaagcgcgcggtgtggcgcgcgccg
gagttcttcgacctgctcgccaagggctcgcactcgcgcgacccgcgcggcctgctcgac
ctggtgctgcccgcgatcgagcgcggccagttgcgggtgatcggcgagatcaccccgcgc
caactggcgcagttgttgatcgcgcgtccggtcatcaagcaccacgtcgaaatcgtgcaa
ctgctgccgaccgaaaccgatgcgctggaagcgatcgccgccgagtgggcgcgcttggaa
ggcgagcgcctcggccgcccggtcgccgacgcgcgcgccctggccgagggcgcgcgcatg
gccgcccagtatttcccggagcagcaggaacccggccgtctgctgcgcctgctcaacgac
gcgctgcagagcgcgctggcggaaacttcgccggcgctgccgctcgaccccgaacgtctg
ctcgcgaccatcgcccagcgcagcggcttgccgctcgacgtcatcgacgaccgccagagc
ctcgacctcgaccgcctgcgcgcctttttccgccagcgcgtgatcggccaggacgaagcc
gtcgacgccctgctcgaccgcatcgccatgctcaaggccggcctgatcgacagcggccgg
ccgatcggcgtgttcctgttcgccggccccaccggcaccggcaagaccgagctggcgaag
gcgctcggcgagctcttgttcggcagcgacgaacgcctgctgcgcctggacatgagcgag
ttccagtcggaggactcggcctggcgcctgaccgccgacgagggcggccagagcggcgtg
cgttcgctgacctcgcgcatccgcgagcagccgttctcggtggtgttgctggacgagttc
gagaaggcccatccgaaagtctgggacctgttcctgcaggtgttcgacgatgcgcgcctg
agcgaccgcagcggtcacaccgccgatttccgccacagcatcatcatcctgaccagcaac
gtcggctcgaccatctcgcgcagcgccggcccgggtttcacctcggcgcgcggcggctat
tcgcgcgacgcggtcgagaaggcgctgttcgagaccttccgccgcgagttcctcaaccgc
ctcgatcggatcgtgctgttcaatccgctcgaccgcagcctgatgcgcgagatcctgcac
aaggaactcaagcgcgtgctgacccggcgcggcctgcgcaaccgcgactgggcggtggaa
tgggagccctcggcgatcgagttcctgctcgaccgcggcttcacccccgacctcggcgcg
cggccgctgcgccgcgcgatcgagcattacctgttggcgccgctggcgcgcagcatcgtc
gagcaccgcgcgccacagggcgaccaatttctgttcgtgcgcagcgccggcgaccagctc
gaggtgcagttcatcgatcccgacgcgtcgcggcgcaacgacggcgccgcggccgaagtc
gtcgcgcccgccgacgccggcgatctgcgcgacctggtgcatgcgccatcggcggcggct
gcggcggtggcgcggctcgatgcgcgtctgcaacagctcgaccagaccgtgagcgcgcag
gattgggtctcggcgcgcgaagccgattacgcgcgcatggccgaggccgatttctggaac
gcgggcgaccgccatccggtgctcgaccgcatcgagcgccgcgaccgcatcgagagcgcg
ctggataccgcccagcgcatgcgccagcggctgcgcgaggacggcggcaacgacgaattc
gccgggcgcatcgcccagttgctgttcctgctcggcctggcggtcgacgccgtgcgcgaa
caacgcccgcaggacgccttgatcgaaatcgataccgacgaggccgcgcacctgcgccac
ggccccgacctgcgcctgtggtggcagcgtctgctggcgatgtatctggcctgggcgcag
cgccgcaacatgcgcgtcgaagtgctgcgccaggacgccgagcgctgcaaggcctggctg
gcggtgagcggcttcggcgccttcgacctgctgcaggccgagtccggcctgcacgtgctc
gaagaccaggaagacggcgtcacccgccgggtttcgctgtcggtgcaggtcgcgccggac
ttgccgggacgcgcgcgcgtcgcccaggccgcggccgaaggcgagcggcgcatcagccgg
cgttaccgcgagtcgccctcgccgttggtccgcgacggcgtgcgcggctggcgcagcggc
cgcctcgaccgcgtgctcggcggcgagttcgacgtgatgcagggcggctga
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